RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ZZZ3Q8IYH5 903 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 LGI4Q8N135 537 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 DNAJB8Q8NHS0 232 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 TP53INP1Q96A56 240 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 OTUB2Q96DC9 234 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 TCEAL4Q96EI5 215 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 SLC46A2Q9BY10 475 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 HEPACAM2A8MVW5 462 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 CD247P20963 164 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 OR1E2P47887 323 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 AVPR1BP47901 424 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 UBXN2BQ14CS0 331 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 DDI2Q5TDH0 399 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
NPHP4-203ENST00000378169 P2RY8Q86VZ1 359 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 GPR26Q8NDV2 337 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 FAM46DQ8NEK8 389 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 FARSBQ9NSD9 589 aaKnown RBP12.8□□□□□ -0.36
NPHP4-203ENST00000378169 TMED5Q9Y3A6 229 aa12.8□□□□□ -0.36
NPHP4-203ENST00000378169 EP400Q96L91 3159 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 LOC285095A0A1B0GVY8 99 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 WASH4PA8MWX3 477 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 SNAP29O95721 258 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ITGA1P56199 1179 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ZNF155Q12901 538 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ELAVL3Q14576 367 aaKnown RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 NFKBIDQ8NI38 313 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 C3orf30Q96M34 536 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 C17orf62Q9BQA9 187 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 POLR2J3Q9H1A7 115 aaKnown RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ADAM30Q9UKF2 790 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 HOXD9P28356 352 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 BMPR1AP36894 532 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 MAGEA3P43357 314 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 DSTNP60981 165 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ARF5P84085 180 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 MXD1Q05195 221 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 DCUN1D3Q8IWE4 304 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 POMGNT2Q8NAT1 580 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 GORASP1Q9BQQ3 440 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 IL23AQ9NPF7 189 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 SPATA7Q9P0W8 599 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 RTCAO00442 366 aaKnown RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 NME4O00746 187 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 TNFRSF10BO14763 440 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 LATO43561 262 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 SLC16A8O95907 504 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ATP4BP51164 291 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 TOMM20Q15388 145 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 PIGGQ5H8A4 983 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 FAM180BQ6P0A1 224 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 COMMD2Q86X83 199 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 SCML4Q8N228 414 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 PGBD5Q8N414 524 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 RGMAQ96B86 450 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 KLF16Q9BXK1 252 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
NPHP4-203ENST00000378169 ZNF624Q9P2J8 865 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-203ENST00000378169 TRBC2A0A5B9 178 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 CPSF4LA6NMK7 179 aaKnown RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 GNB5O14775 395 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 ARSFP54793 590 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 TLR1Q15399 786 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 MEP1AQ16819 746 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 GTDC1Q4AE62 458 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 ZNF776Q68DI1 518 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 HM13Q8TCT9 377 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 PYURFQ96I23 114 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 RETREG1Q9H6L5 497 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 RHCGQ9UBD6 479 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 TRPS1Q9UHF7 1281 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 HMX2A2RU54 273 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 ATXN1LP0C7T5 689 aaKnown RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 IST1P53990 364 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 WDR5P61964 334 aaKnown RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 PCDH1Q08174 1060 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 LASP1Q14847 261 aaKnown RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 UXS1Q8NBZ7 420 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 GPR151Q8TDV0 419 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 L3HYPDHQ96EM0 354 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 DPH2Q9BQC3 489 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 FAM120CQ9NX05 1096 aaKnown RBP12.78□□□□□ -0.36
NPHP4-203ENST00000378169 KNTC1P50748 2209 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 AIREO43918 545 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 PCSK2P16519 638 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 PGDP52209 483 aa12.78□□□□□ -0.36
NPHP4-203ENST00000378169 OLR1P78380 273 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms