RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 HNRNPA1P09651 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ACRV1P26436 265 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 CDH15P55291 814 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 MEF2AQ02078 507 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 MXD1Q05195 221 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 PCBP2Q15366 365 aaKnown RBP eCLIP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 TMCO2Q7Z6W1 182 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 OR4K1Q8NGD4 311 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 PYURFQ96I23 114 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 IFT27Q9BW83 186 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ATXN10Q9UBB4 475 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 CLEC4AQ9UMR7 237 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ZNF99A8MXY4 864 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 GRK6P43250 576 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 PTGES3Q15185 160 aaKnown RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ABHD13Q7L211 337 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ZNF483Q8TF39 744 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 IL4I1Q96RQ9 567 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 MCUBQ9NWR8 336 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 UBE2QL1A1L167 161 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 TNFP01375 233 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 IL4RP24394 825 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 BNC1Q01954 994 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ANKRD26P1Q6NSI1 321 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 NOXRED1Q6NXP6 359 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 IKBIPQ70UQ0 350 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 HTRA1Q92743 480 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 NEUROD4Q9HD90 331 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 H7BY64 318 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 GNB5O14775 395 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 SSNA1O43805 119 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 H1F0P07305 194 aaKnown RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 FDXRP22570 491 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 ZNF763Q0D2J5 394 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 EOGTQ5NDL2 527 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 UTS2BQ765I0 119 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 TRAM1L1Q8N609 369 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 NFKBIDQ8NI38 313 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 PRAP1Q96NZ9 151 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 DPYSL5Q9BPU6 564 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 GSDMCQ9BYG8 508 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 POLR2J2Q9GZM3 115 aaKnown RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 IRAK3Q9Y616 596 aa13.22□□□□□ -0.29
C9orf47-203ENST00000375851 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 RSL1D1O76021 490 aaKnown RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 FPR1P21462 350 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 IL12BP29460 328 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 CCT3P49368 545 aaKnown RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 SLC30A6Q6NXT4 461 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 NCEH1Q6PIU2 408 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 FCGR1BQ92637 280 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 CLDN25C9JDP6 229 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 WWP2O00308 870 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 TGM5O43548 720 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 C6orf47O95873 294 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 ECDO95905 644 aaPredicted RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 MADCAM1Q13477 382 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 NPTX1Q15818 432 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 SFT2D3Q587I9 215 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 TOR1AIP1Q5JTV8 583 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 ZNF648Q5T619 568 aaPredicted RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 EGFLAMQ63HQ2 1017 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 PEG10Q86TG7 708 aaKnown RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 OR10H4Q8NGA5 316 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 IPCEF1Q8WWN9 437 aaPredicted RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.29
C9orf47-203ENST00000375851 CEP295NLQ96MC4 621 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 KCNC2Q96PR1 638 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 TBC1D17Q9HA65 648 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 IL23AQ9NPF7 189 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 OARD1Q9Y530 152 aa13.21□□□□□ -0.29
C9orf47-203ENST00000375851 KHDRBS3O75525 346 aaKnown RBP13.21□□□□□ -0.3
C9orf47-203ENST00000375851 REM1O75628 298 aa13.21□□□□□ -0.3
C9orf47-203ENST00000375851 XKP51811 444 aa13.21□□□□□ -0.3
C9orf47-203ENST00000375851 ZNF630Q2M218 657 aaPredicted RBP13.21□□□□□ -0.3
C9orf47-203ENST00000375851 KLHL22Q53GT1 634 aa13.21□□□□□ -0.3
C9orf47-203ENST00000375851 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.3
C9orf47-203ENST00000375851 C11orf24Q96F05 449 aaPredicted RBP13.21□□□□□ -0.3
C9orf47-203ENST00000375851 PTGDR2Q9Y5Y4 395 aa13.21□□□□□ -0.3
C9orf47-203ENST00000375851 H7C0S8 307 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 SOCS7O14512 581 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 PRAMEF12O95522 483 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 PRKACGP22612 351 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 AZGP1P25311 298 aaKnown RBP13.2□□□□□ -0.3
C9orf47-203ENST00000375851 SYT16Q17RD7 645 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 NADK2Q4G0N4 442 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 TMEM25Q86YD3 366 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 PNPLA1Q8N8W4 532 aa13.2□□□□□ -0.3
C9orf47-203ENST00000375851 CAPSLQ8WWF8 208 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms