RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 FAM174BQ3ZCQ3 159 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 C1orf53Q5VUE5 145 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 SPERTQ8NA61 448 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 COPS4Q9BT78 406 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 C1QTNF3Q9BXJ4 246 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 RPRD1BQ9NQG5 326 aaKnown RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 LYVE1Q9Y5Y7 322 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 A0A0X1KG70 313 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 ABHD14A-ACY1A0A1B0GW23 586 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 UBA6A0AVT1 1052 aaPredicted RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 BTN3A1O00481 513 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 STX16O14662 325 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 TGM5O43548 720 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 RPLP0P05388 317 aaKnown RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 ETV6P41212 452 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 RFX2P48378 723 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 HK3P52790 923 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 SMAD3P84022 425 aaKnown RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 SLAMF1Q13291 335 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 RAB33AQ14088 237 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 ZNF235Q14590 738 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 MAPKAPK3Q16644 382 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 DUSP7Q16829 419 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 AP5B1Q2VPB7 878 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 GET4Q7L5D6 327 aaPredicted RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 OR8H2Q8N162 312 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 TP53I13Q8NBR0 393 aaPredicted RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 KBTBD8Q8NFY9 601 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 OR13C4Q8NGS5 318 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 GRIP1Q9Y3R0 1128 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 LCHNA4D1U4 455 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 IFRD1O00458 451 aaPredicted RBP12.52□□□□□ -0.4
MSH5-204ENST00000375755 TLL1O43897 1013 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 CAPN1P07384 714 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 LINC00271P0C7V0 271 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 SLC19A1P41440 591 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 UGT2B15P54855 530 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 SMU1Q2TAY7 513 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 PROX2Q3B8N5 592 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 RUNDC3AQ59EK9 446 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 RNF219Q5W0B1 726 aaPredicted RBP12.52□□□□□ -0.4
MSH5-204ENST00000375755 CXorf57Q6NSI4 855 aaKnown RBP12.52□□□□□ -0.4
MSH5-204ENST00000375755 GAREM2Q75VX8 874 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 SNX20Q7Z614 316 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 DDX53Q86TM3 631 aaKnown RBP12.52□□□□□ -0.4
MSH5-204ENST00000375755 ENTHD1Q8IYW4 607 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 TRIM63Q969Q1 353 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 FYTTD1Q96QD9 318 aaKnown RBP12.52□□□□□ -0.4
MSH5-204ENST00000375755 CITED4Q96RK1 184 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 IL21Q9HBE4 155 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 AMBNQ9NP70 447 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 CLEC4EQ9ULY5 219 aa12.52□□□□□ -0.4
MSH5-204ENST00000375755 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 E2F3O00716 465 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 FGF18O76093 207 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 CA5AP35218 305 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 MAGEA2P43356 314 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 MAPKAPK2P49137 400 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 KIAA1614Q5VZ46 1190 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 MRNIPQ6NTE8 343 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 RAB43Q86YS6 212 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 GRPEL2Q8TAA5 225 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 METTL6Q8TCB7 284 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 PIK3R3Q92569 461 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 FCGR1BQ92637 280 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 TADA1Q96BN2 335 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 ARMC5Q96C12 935 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 RANGRFQ9HD47 186 aaPredicted RBP12.52□□□□□ -0.41
MSH5-204ENST00000375755 MRPL17Q9NRX2 175 aaKnown RBP12.52□□□□□ -0.41
MSH5-204ENST00000375755 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.41
MSH5-204ENST00000375755 PCDHGC4Q9Y5F7 938 aa12.52□□□□□ -0.41
MSH5-204ENST00000375755 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 KLK8O60259 260 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CD160O95971 181 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 KRT6AP02538 564 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 F11P03951 625 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 KRT6BP04259 564 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 RHOCP08134 193 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 UBL4AP11441 157 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 HOXB8P17481 243 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 RRM2P31350 389 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 HTR2BP41595 481 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 LBX1P52954 281 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CRISP3P54108 245 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 RPP38P78345 283 aaKnown RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 ARF5P84085 180 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 RAD51Q06609 339 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 C5orf22Q49AR2 442 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 SPANXN4Q5MJ08 99 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 OR2T5Q6IEZ7 315 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 NOXA1Q86UR1 476 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CYP4Z2PQ8N1L4 340 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 OR2T29Q8NH02 315 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms