RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ABCB9Q9NP78 766 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 EOMESO95936 686 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 PAHP00439 452 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 DDX6P26196 483 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 MYH9P35579 1960 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF132P52740 706 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 NCBP2-AS2Q69YL0 99 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TCTEX1D2Q8WW35 142 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 MUS81Q96NY9 551 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SMOC2Q9H3U7 446 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 NFKB2Q00653 900 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 RAP1GAP2Q684P5 730 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF615Q8N8J6 731 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 OR5J2Q8NH18 312 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 GORASP2Q9H8Y8 452 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 DDX4Q9NQI0 724 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 AGPAT4Q9NRZ5 378 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 XPNPEP2O43895 674 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TMEM127O75204 238 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 GPC2Q8N158 579 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SCRN2Q96FV2 425 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TBATAQ96M53 351 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 RIOK2Q9BVS4 552 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 FAM118AQ9NWS6 357 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 KCNN3Q9UGI6 736 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SMIM28A0A1B0GU29 152 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 UGDHO60701 494 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 CREB1P16220 341 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 CDH11P55287 796 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TRMT10BQ6PF06 316 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TMPRSS11BQ86T26 416 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 NOXA1Q86UR1 476 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 OR10H4Q8NGA5 316 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 MAFIPQ8WZ33 124 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 HSH2DQ96JZ2 352 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 C12orf42Q96LP6 360 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF354BQ96LW1 612 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 FUZQ9BT04 418 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 DHRS4Q9BTZ2 278 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 PHPT1Q9NRX4 125 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 NUBP2Q9Y5Y2 271 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ITGAMP11215 1152 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 OR3A3P47888 321 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 OR3A2P47893 321 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SCAPQ12770 1279 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 NPRL3Q12980 569 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 HMGN3Q15651 99 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 PLEKHS1Q5SXH7 462 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 PRPF38BQ5VTL8 546 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SULT1C2O00338 296 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 HSPA12AO43301 675 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 LRATO95237 230 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 MTPNP58546 118 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 RAB12Q6IQ22 244 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 CYP4V2Q6ZWL3 525 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 KCNS3Q9BQ31 491 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ZDHHC2Q9UIJ5 367 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ADAMTS6Q9UKP5 1117 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TLL1O43897 1013 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 ST3GAL4Q11206 333 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SPARTQ8N0X7 666 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 GPR156Q8NFN8 814 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TWNKQ96RR1 684 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 CCSER2Q9H7U1 834 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TPT1P8Q9HAU6 139 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TOPAZ1Q8N9V7 1692 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 TSPAN5P62079 268 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 SF3A2Q15428 464 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 STARD7Q9NQZ5 370 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 MRPL17Q9NRX2 175 aaKnown RBP9.91□□□□□ -0.82
PTCH1-204ENST00000375290 NDUFAF4Q9P032 175 aa9.91□□□□□ -0.82
PTCH1-204ENST00000375290 H3BMQ9 156 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 PAK4O96013 591 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 DNASE1P24855 282 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 S100PP25815 95 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 TNFSF9P41273 254 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 TRAM2Q15035 370 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 CCDC58Q4VC31 144 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 COG8Q96MW5 612 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SLC22A31A6NKX4 558 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ADORA2AP29274 412 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 FAM151BQ6UXP7 276 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF433Q8N7K0 673 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 NEIL3Q8TAT5 605 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 GPER1Q99527 375 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SLC35C2Q9NQQ7 365 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 INPP5EQ9NRR6 644 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 CYTH4Q9UIA0 394 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ADH1AP07327 375 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 HLA-EP13747 358 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 EIF2S3P41091 472 aaKnown RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SLC9A5Q14940 896 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 HMBOX1Q6NT76 420 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 OVCA2Q8WZ82 227 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 RGMAQ96B86 450 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 HS6ST2Q96MM7 605 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 UGT2A1Q9Y4X1 527 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 NUDT19A8MXV4 375 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms