RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CRYZQ08257 329 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 OPCMLQ14982 345 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 SV2CQ496J9 727 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TMEM159Q96B96 161 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 RNF31Q96EP0 1072 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ULBP1Q9BZM6 244 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ASB7Q9H672 318 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 MRTO4Q9UKD2 239 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 A8MVJ9 347 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 F5H5P2 479 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 FARS2O95363 451 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 CSF3P09919 207 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 BCKDHAP12694 445 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 DNASE1L1P49184 302 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 RETSATQ6NUM9 610 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ZPBP2Q6X784 338 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 NMNAT1Q9HAN9 279 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 ZNF282Q9UDV7 671 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 A0A1W2PS29 197 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TMEM127O75204 238 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 CDK14O94921 469 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 LYPLA2O95372 231 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TLE2Q04725 743 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 SMAD1Q15797 465 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 SPOUT1Q5T280 376 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 OR56B2PQ8NGI1 322 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 NOBOXO60393 691 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TROAPQ12815 778 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 HASPINQ8TF76 798 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 DBNDD1Q9H9R9 158 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ZNF490Q9ULM2 529 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 H7C417 338 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 MT-ND4LP03901 98 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 CPB1P15086 417 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 VSX2P58304 361 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 LASP1Q14847 261 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 SMUG1Q53HV7 270 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 C7orf61Q8IZ16 206 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 PARP16Q8N5Y8 322 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 MUC3BQ9H195 1237 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 MAGEB17A8MXT2 336 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 HCRTR2O43614 444 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 IL7RP16871 459 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ALG10BQ5I7T1 473 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 PPP1R3BQ86XI6 285 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TCEAL2Q9H3H9 227 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 NLKQ9UBE8 527 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 PRG4Q92954 1404 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 TTLL8A6PVC2 850 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 NKRFO15226 690 aaKnown RBP eCLIP6.45□□□□□ -1.38
UBR4-204ENST00000375254 RBMXL2O75526 392 aaKnown RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 CLDN9O95484 217 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 HBE1P02100 147 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 HOXD10P28358 340 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 GCAP28676 217 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TSTD2Q5T7W7 516 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 SHKBP1Q8TBC3 707 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 GPR151Q8TDV0 419 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 SYT3Q9BQG1 590 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ADAM19Q9H013 955 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 A0A096LPI6 279 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 ARPC2O15144 300 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 CD63P08962 238 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 JUNDP17535 347 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 SNCAP37840 140 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 RRAS2P62070 204 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 KEAP1Q14145 624 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 TMEM132BQ14DG7 1078 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 BATFQ16520 125 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 FBXO31Q5XUX0 539 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 KANSL1Q7Z3B3 1105 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 COMMD2Q86X83 199 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 LRRC46Q96FV0 321 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 CCNL2Q96S94 520 aaPredicted RBP6.45□□□□□ -1.38
UBR4-204ENST00000375254 MXRA8Q9BRK3 442 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 NUMBLQ9Y6R0 609 aa6.45□□□□□ -1.38
UBR4-204ENST00000375254 GGT3PA6NGU5 568 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TYROBPO43914 113 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GIMD1P0DJR0 217 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GGT2P36268 569 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 HCCSP53701 268 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MXD1Q05195 221 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 C19orf57Q0VDD7 668 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 IL4I1Q96RQ9 567 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ZNF251Q9BRH9 671 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 YY2O15391 372 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MAT1AQ00266 395 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 LIX1LQ8IVB5 337 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ALG3Q92685 438 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ABCG4Q9H172 646 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CIDEAO60543 219 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CD1EP15812 388 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CAV3P56539 151 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GLO1Q04760 184 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CBWD6Q4V339 395 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TMEM119Q4V9L6 283 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 FSTL4Q6MZW2 842 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 OR8D1Q8WZ84 308 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms