RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 BFSP2Q13515 415 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 PNLIPRP3Q17RR3 467 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 C9orf50Q5SZB4 431 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 IRAK1BP1Q5VVH5 260 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 LRRC74BQ6ZQY2 392 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 ACTRT1Q8TDG2 376 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 PAQR8Q8TEZ7 354 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 SLC25A36Q96CQ1 311 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 SNX22Q96L94 193 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 POLDIP3Q9BY77 421 aaKnown RBP8.74□□□□□ -1.01
UBR4-201ENST00000375218 ZCCHC4Q9H5U6 513 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 MYOZ2Q9NPC6 264 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 WIF1Q9Y5W5 379 aa8.74□□□□□ -1.01
UBR4-201ENST00000375218 ZNF638Q14966 1978 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 EIF4E1BA6NMX2 242 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 TCP10L2B9ZVM9 353 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 NPIPA2E9PIF3 369 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 hCG_2039718K7EN88 272 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 PFDN6O15212 129 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TOP3BO95985 862 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 HOXB3P14651 431 aaPredicted RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 CCNOP22674 350 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CXCR4P61073 352 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 PCLAFQ15004 111 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CST9LP1Q5W188 147 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 SLC39A4Q6P5W5 647 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 RBFAQ8N0V3 343 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 COLGALT1Q8NBJ5 622 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 OR10J5Q8NHC4 309 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 MITD1Q8WV92 249 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ST8SIA2Q92186 375 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 PARK7Q99497 189 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 POP1Q99575 1024 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBR4-201ENST00000375218 PIGUQ9H490 435 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 FAM118AQ9NWS6 357 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 PTTG2Q9NZH5 202 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ADAMTS5Q9UNA0 930 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 F8WDY8 70 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CNOT3O75175 753 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 BCL10O95999 233 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 GH2P01242 217 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TNNC2P02585 160 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 IFI30P13284 250 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 NELFEP18615 380 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 GAMTQ14353 236 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 MAPK11Q15759 364 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 SLC9A4Q6AI14 798 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 NEK8Q86SG6 692 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 SLC13A5Q86YT5 568 aaPredicted RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 ULK2Q8IYT8 1036 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 LIX1Q8N485 282 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 EME1Q96AY2 570 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 SLC7A6OSQ96CW6 309 aaPredicted RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 SERAC1Q96JX3 654 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 HSH2DQ96JZ2 352 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 C9orf72Q96LT7 481 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 SLITRK1Q96PX8 696 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ZNF577Q9BSK1 485 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 MSRAQ9UJ68 235 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 A0A1W2PRX2 142 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TMEM233B4DJY2 109 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ARVCFO00192 962 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TCAPO15273 167 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TNFSF14O43557 240 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 MT-ND5P03915 603 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 LBPP18428 481 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 MYF6P23409 242 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CDKN1AP38936 164 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 PSMD4P55036 377 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 AP3S2P59780 193 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CCZ1BP86790 482 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CCZ1P86791 482 aaPredicted RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 KLHL26Q53HC5 615 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 MFSD14CQ5VZR4 134 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ARMCX5Q6P1M9 558 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ADGRF2Q8IZF7 708 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 TMEM116Q8NCL8 245 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 KIAA0895Q8NCT3 520 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 AGBL3Q8NEM8 1001 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 OR2L5Q8NG80 312 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 OR4K14Q8NGD5 310 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 LHFPL5Q8TAF8 219 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 UBA3Q8TBC4 463 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 HPS1Q92902 700 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 CERS2Q96G23 380 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 RTKNQ9BST9 563 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 SCNM1Q9BWG6 230 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 EBF3Q9H4W6 596 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 AKIRIN1Q9H9L7 192 aaPredicted RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 MRPS30Q9NP92 439 aaKnown RBP8.73□□□□□ -1.01
UBR4-201ENST00000375218 KCNMB3Q9NPA1 279 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 PLCXD1Q9NUJ7 323 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 FAIMQ9NVQ4 179 aa8.73□□□□□ -1.01
UBR4-201ENST00000375218 ERN1O75460 977 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 STBD1O95210 358 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 KAT7O95251 611 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 PGK1P00558 417 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms