RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 CETN2P41208 172 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 ZNF658BQ4V348 819 aaPredicted RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 EMC4Q5J8M3 183 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 FIGLAQ6QHK4 219 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 BBS12Q6ZW61 710 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 CXorf67Q86X51 503 aaPredicted RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 SLC5A8Q8N695 610 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 TGIF2Q9GZN2 237 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 MKKSQ9NPJ1 570 aaPredicted RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 ZC3H7BQ9UGR2 993 aaKnown RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 GOLGA6L9A6NEM1 432 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 HS6ST1O60243 411 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 SRP72O76094 671 aaKnown RBP16.42■□□□□ 0.22
H2AFX-201ENST00000375167 TPBGLP0DKB5 382 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 ERVK-10P10266 1014 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 MSNP26038 577 aaKnown RBP16.42■□□□□ 0.22
H2AFX-201ENST00000375167 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 OR5K2Q8NHB8 316 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 HEXDCQ8WVB3 486 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 P3H4Q92791 437 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 TMEM125Q96AQ2 219 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 TRIM44Q96DX7 344 aaPredicted RBP16.42■□□□□ 0.22
H2AFX-201ENST00000375167 LRRC46Q96FV0 321 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 HES6Q96HZ4 224 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 CABS1Q96KC9 395 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 COPS8Q99627 209 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 HEMGNQ9BXL5 484 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 OSBPL8Q9BZF1 889 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 LZTFL1Q9NQ48 299 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 UBP1Q9NZI7 540 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 C19orf25Q9UFG5 118 aaPredicted RBP16.42■□□□□ 0.22
H2AFX-201ENST00000375167 PPP2R2CQ9Y2T4 447 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 MPDZO75970 2070 aa16.42■□□□□ 0.22
H2AFX-201ENST00000375167 IGHV3-20A0A0C4DH32 117 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 AP2A1O95782 977 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 PECAM1P16284 738 aaPredicted RBP16.41■□□□□ 0.22
H2AFX-201ENST00000375167 ACVR2AP27037 513 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 SIRPB2Q5JXA9 342 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 CATSPEREQ5SY80 951 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 FAM182AQ5T1J6 154 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 LIX1LQ8IVB5 337 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 LRRC75A-AS1Q8N1F1 130 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 SLC25A41Q8N5S1 370 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 ULK4Q96C45 1275 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 C10orf90Q96M02 699 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 NPAS2Q99743 824 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 TTYH2Q9BSA4 534 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 MENTQ9BUN1 341 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 STOX2Q9P2F5 926 aaPredicted RBP16.41■□□□□ 0.22
H2AFX-201ENST00000375167 PACSIN2Q9UNF0 486 aaPredicted RBP16.41■□□□□ 0.22
H2AFX-201ENST00000375167 ZNF407Q9C0G0 2248 aa16.41■□□□□ 0.22
H2AFX-201ENST00000375167 A0A0G2JNJ9 132 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 TRIM64A6NGJ6 449 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 TRIM64BA6NI03 449 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 FIGNL2A6NMB9 653 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 APOC4-APOC2K7ER74 178 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 CDK2AP1O14519 115 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 MAN1A2O60476 641 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 SMPD2O60906 423 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 S1PR4O95977 384 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 APOC2P02655 101 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 EIF2S1P05198 315 aaKnown RBP16.4■□□□□ 0.22
H2AFX-201ENST00000375167 ANXA5P08758 320 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 GSTM1P09488 218 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 PKLRP30613 574 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 RFC3P40938 356 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 GSTM4Q03013 218 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 B3GNT6Q6ZMB0 384 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 CPEB2Q7Z5Q1 589 aaKnown RBP16.4■□□□□ 0.22
H2AFX-201ENST00000375167 TFB1MQ8WVM0 346 aaKnown RBP16.4■□□□□ 0.22
H2AFX-201ENST00000375167 ZNF592Q92610 1267 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 MVB12AQ96EY5 273 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 ALS2CR12Q96Q35 445 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 PLSCR2Q9NRY7 297 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 Q9UFV3 132 aa16.4■□□□□ 0.22
H2AFX-201ENST00000375167 KLF13Q9Y2Y9 288 aaPredicted RBP16.4■□□□□ 0.22
H2AFX-201ENST00000375167 LOC285095A0A1B0GVY8 99 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 CTSVO60911 334 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 PDE9AO76083 593 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 TJP3O95049 919 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 GOSR1O95249 250 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 GLI4P10075 376 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 TACR1P25103 407 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 CHRNA4P43681 627 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 TAS2R50P59544 299 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 PTPRCAPQ14761 206 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 SF1Q15637 639 aaKnown RBP16.39■□□□□ 0.21
H2AFX-201ENST00000375167 EXT1Q16394 746 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 CCDC181Q5TID7 509 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 FRMPD2BQ6IN97 320 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 PAOXQ6QHF9 649 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 PRSS57Q6UWY2 283 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 YTHDF3Q7Z739 585 aaKnown RBP16.39■□□□□ 0.21
H2AFX-201ENST00000375167 TAX1BP1Q86VP1 789 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 ZC3H7AQ8IWR0 971 aaKnown RBP16.39■□□□□ 0.21
H2AFX-201ENST00000375167 LGI4Q8N135 537 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 ATG10Q9H0Y0 220 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 GLOD4Q9HC38 313 aa16.39■□□□□ 0.21
H2AFX-201ENST00000375167 B4GALT7Q9UBV7 327 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms