RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 LGI4Q8N135 537 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 PLD6Q8N2A8 252 aaKnown RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 NATD1Q8N6N6 113 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF420Q8TAQ5 688 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 SLC22A17Q8WUG5 538 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 NEDD4LQ96PU5 975 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 BHMG1C9JSJ3 638 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 PPM1BO75688 479 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 PTPN2P17706 415 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 RPL17P18621 184 aaKnown RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 DSTNP60981 165 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 RPS24P62847 133 aaKnown RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 MADCAM1Q13477 382 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 BTBD16Q32M84 506 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 OR4C6Q8NH72 309 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 PTPN18Q99952 460 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 HSPB11Q9Y547 144 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 PSAT1Q9Y617 370 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 KDELR3O43731 214 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 RNASEH2AO75792 299 aaKnown RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 KAT7O95251 611 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 VIPP01282 170 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 NOGQ13253 232 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 LYSMD3Q7Z3D4 306 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 OR5J2Q8NH18 312 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 HSPBAP1Q96EW2 488 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 PHB2Q99623 299 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 NLE1Q9NVX2 485 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-202ENST00000373474 SPATA7Q9P0W8 599 aa13.83□□□□□ -0.2
LMX1B-202ENST00000373474 SAP18O00422 153 aaKnown RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 GBX2P52951 348 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 TPGS2Q68CL5 300 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 TNFAIP8L2Q6P589 184 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF773Q6PK81 442 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ACDQ96AP0 544 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SUV39H2Q9H5I1 410 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ELAC1Q9H777 363 aaKnown RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 HEBP2Q9Y5Z4 205 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 CSTF2P33240 577 aaKnown RBP eCLIP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ARL3P36405 182 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 GNALP38405 381 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 NCBP2P52298 156 aaKnown RBP eCLIP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 STC1P52823 247 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 EMX2Q04743 252 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 OR9I1Q8NGQ6 314 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 IL36AQ9UHA7 158 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 A0A075B6Q4 140 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 DAPL1A0PJW8 107 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 KLHL33A6NCF5 533 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 PIK3CBP42338 1070 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 DGKGP49619 791 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 FRG2Q64ET8 278 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 GET4Q7L5D6 327 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 OR10H4Q8NGA5 316 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 FRG2BQ96QU4 278 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SMOQ99835 787 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 RAB11FIP5Q9BXF6 653 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF717Q9BY31 904 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 RANBP3Q9H6Z4 567 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 PHRF1Q9P1Y6 1649 aaKnown RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 PLD2O14939 933 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF208O43345 1280 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 HTRA2O43464 458 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 CREG1O75629 220 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 RASGEF1BQ0VAM2 473 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 RPA4Q13156 261 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 DSC3Q14574 896 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 CHRNA6Q15825 494 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SLC30A6Q6NXT4 461 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 TREML1Q86YW5 311 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ELMOD2Q8IZ81 293 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 NUS1Q96E22 293 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 FBXL20Q96IG2 436 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 DEFB118Q96PH6 123 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 KXD1Q9BQD3 176 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SLC30A2Q9BRI3 323 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF700Q9H0M5 742 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 EVA1BQ9NVM1 165 aa13.82□□□□□ -0.2
LMX1B-202ENST00000373474 SPIN1Q9Y657 262 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-202ENST00000373474 MYH8P13535 1937 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 G6PDP11413 515 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 NAPRTQ6XQN6 538 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 SAMD14Q8IZD0 417 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CAMK1GQ96NX5 476 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 FCRL3Q96P31 734 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 TSGA13Q96PP4 275 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 OR2AG1Q9H205 316 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 TM9SF3Q9HD45 589 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MRPS30Q9NP92 439 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CMAHPQ9Y471 501 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 NRP1O14786 923 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms