RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CLDN9O95484 217 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 EBLN1P0CF75 366 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 CD9P21926 228 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 RGS6P49758 472 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 RGS4P49798 205 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 SGSHP51688 502 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 MRPL10Q7Z7H8 261 aaKnown RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 ZZZ3Q8IYH5 903 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 PAF1Q8N7H5 531 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 ASCC1Q8N9N2 400 aaKnown RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 USP7Q93009 1102 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 SDHCQ99643 169 aaPredicted RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 SLC7A5P2Q9GIP4 190 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 MAGEH1Q9H213 219 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 ELOVL6Q9H5J4 265 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 TLR8Q9NR97 1041 aaKnown RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 SPASTQ9UBP0 616 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 NLRC5Q86WI3 1866 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 RGS5O15539 181 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 KIAA0513O60268 411 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 TSC22D2O75157 780 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 PRAMEF1O95521 474 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 CDK1P06493 297 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 ADORA3P0DMS8 318 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 POU2F1P14859 743 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 HTR3AP46098 478 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 CACNG1Q06432 222 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 ST3GAL4Q11206 333 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 SPRYD7Q5W111 196 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 FAHD1Q6P587 224 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 PTOV1Q86YD1 416 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 DNAJC22Q8N4W6 341 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 CEP19Q96LK0 163 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 ASB8Q9H765 288 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 RPS6KA6Q9UK32 745 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 WBP11Q9Y2W2 641 aaKnown RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 PATJQ8NI35 1801 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 PTPRDP23468 1912 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 KRT6AP02538 564 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 C9P02748 559 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 KRT6BP04259 564 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 KIR3DL1P43629 444 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 SLC15A1P46059 708 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 OR1G1P47890 313 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 KRT6CP48668 564 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 DGKEP52429 567 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 UGT2B15P54855 530 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 SEMG2Q02383 582 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 MED22Q15528 200 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 TBCEQ15813 527 aaPredicted RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 LRRC26Q2I0M4 334 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 ZFP69Q49AA0 526 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 INO80DQ53TQ3 878 aaPredicted RBP13.26□□□□□ -0.29
USP49-201ENST00000373006 KBTBD8Q8NFY9 601 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 FCGR1BQ92637 280 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 PITX2Q99697 317 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 NTMT1Q9BV86 223 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 KATNAL1Q9BW62 490 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 PEX16Q9Y5Y5 336 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 CELF2O95319 508 aaKnown RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 F11P03951 625 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 OPN1SWP03999 348 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 ZNF7P17097 686 aaPredicted RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 CYP27C1Q4G0S4 372 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 CCSAPQ6IQ19 270 aaPredicted RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 SERPINA11Q86U17 422 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 DENND1CQ8IV53 801 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 ADGRG2Q8IZP9 1017 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 STK40Q8N2I9 435 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 TBC1D20Q96BZ9 403 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 C8orf48Q96LL4 319 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 OR5M11Q96RB7 305 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 NXF2Q9GZY0 626 aaKnown RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 RPRD1BQ9NQG5 326 aaKnown RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 A0A0U1RQF3 1178 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 KDELR3O43731 214 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 EPORP19235 508 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 TYMPP19971 482 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 DGKAP23743 735 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 AZGP1P25311 298 aaKnown RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 FAM110CQ1W6H9 321 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 ZMAT1Q5H9K5 638 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 ATXN7L2Q5T6C5 722 aaPredicted RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 CBLL1Q75N03 491 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 FAM124AQ86V42 546 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 GALNT12Q8IXK2 581 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 SLC5A8Q8N695 610 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 SPPL2AQ8TCT8 520 aa13.25□□□□□ -0.29
USP49-201ENST00000373006 GTF3C2Q8WUA4 911 aaPredicted RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 SKA2Q8WVK7 121 aaPredicted RBP13.25□□□□□ -0.29
USP49-201ENST00000373006 TSEN34Q9BSV6 310 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms