RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 H0YGN5 161 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 MPZL2O60487 215 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 GPR107Q5VW38 600 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 KIAA1161Q6NSJ0 714 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 NIPAL1Q6NVV3 410 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 USP53Q70EK8 1073 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 TSACCQ96A04 125 aaPredicted RBP14.3□□□□□ -0.12
NDC1-201ENST00000371429 TGM7Q96PF1 710 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 CGREF1Q99674 301 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 POLR2J3Q9H1A7 115 aaKnown RBP14.3□□□□□ -0.12
NDC1-201ENST00000371429 C11orf16Q9NQ32 467 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 IRAK3Q9Y616 596 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 ZNF860A6NHJ4 632 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 HAT1O14929 419 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 RGS10O43665 173 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 ANGPTL1O95841 491 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 CLDN10P78369 228 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 METTL27Q8N6F8 245 aaPredicted RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 GRHL3Q8TE85 626 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 KLHL33A6NCF5 533 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 ASGR2P07307 311 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 SYPP08247 313 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 SLC10A2Q12908 348 aaPredicted RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 SLC44A4Q53GD3 710 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 PM20D1Q6GTS8 502 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 TMEM214Q6NUQ4 689 aaKnown RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 SVOPLQ8N434 492 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 OR56A1Q8NGH5 318 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 OR2AJ1Q8NGZ0 328 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 STRA6Q9BX79 667 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 ADRB3P13945 408 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 CEBPBP17676 345 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 ACADLP28330 430 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 GNALP38405 381 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 KCNJ5P48544 419 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 DNASE1L1P49184 302 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 ZNF267Q14586 743 aaPredicted RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 GANABQ14697 944 aaKnown RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 FGF13Q92913 245 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 TPK1Q9H3S4 243 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 MUSKO15146 869 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 BCHEP06276 602 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 LYNP07948 512 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 THEGLP0DJG4 465 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 RAP2AP10114 183 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 HRH2P25021 359 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 HMGCLP35914 325 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 CCT3P49368 545 aaKnown RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 PDX1P52945 283 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 ID2Q02363 134 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 MYBPC3Q14896 1274 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 DUOXA1Q1HG43 343 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 LCN1P1Q5VSP4 162 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 OR52B2Q96RD2 323 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 PSMD11O00231 422 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 RENP00797 406 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 NCEH1Q6PIU2 408 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 KRT74Q7RTS7 529 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 SCD5Q86SK9 330 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 OR6K6Q8NGW6 343 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 TVP23BQ9NYZ1 205 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 PAIP2BQ9ULR5 123 aaKnown RBP14.29□□□□□ -0.12
NDC1-201ENST00000371429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.29□□□□□ -0.12
NDC1-201ENST00000371429 HCFC2Q9Y5Z7 792 aa14.29□□□□□ -0.12
NDC1-201ENST00000371429 GLOD5A6NK44 160 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 SOCS7O14512 581 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 KHNYNO15037 678 aaKnown RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 SRCP12931 536 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 CDKN1CP49918 316 aaPredicted RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 RIPK1Q13546 671 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 PYDC2Q56P42 97 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 CEACAM20Q6UY09 585 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 CHST14Q8NCH0 376 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 LRTOMTQ8WZ04 291 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 PTCHD1Q96NR3 888 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 LDAHQ9H6V9 325 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 SCML1Q9UN30 329 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 OPN1SWP03999 348 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 LEPRP48357 1165 aaKnown RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 EEFSECP57772 596 aaKnown RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 B3GNT6Q6ZMB0 384 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 TAS1R1Q7RTX1 841 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 IGDCC3Q8IVU1 814 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.28□□□□□ -0.122e-7■■■■■ 102.3
NDC1-201ENST00000371429 C3orf58Q8NDZ4 430 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 PHOSPHO1Q8TCT1 267 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 RBCK1Q9BYM8 510 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 PLK4O00444 970 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 CAPN5O15484 640 aaPredicted RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 LILRB3O75022 631 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 FHP07954 510 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 CDK6Q00534 326 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 LPAL2Q16609 132 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 AHSA2Q719I0 299 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms