RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TESCQ96BS2 214 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 EGLN2Q96KS0 407 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 TRIM8Q9BZR9 551 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 PCDHAC1Q9H158 963 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 SIRT5Q9NXA8 310 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 DGKBQ9Y6T7 804 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 FANCMQ8IYD8 2048 aa16.86■□□□□ 0.29
SSBP3-203ENST00000371319 A0A1W2PPC4 97 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 H3BNX3 289 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PRICKLE3O43900 615 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PGRP06401 933 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 HSD17B1P14061 328 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 GCKP35557 465 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 NUDT1P36639 197 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ACTR1BP42025 376 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PIK3CBP42338 1070 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 C21orf58P58505 322 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ACTR1AP61163 376 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 EIF2B5Q13144 721 aaKnown RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 SPIN4Q56A73 249 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 RABL3Q5HYI8 236 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ICE2Q659A1 982 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 NANOGP8Q6NSW7 305 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 TMIGD1Q6UXZ0 262 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 BHLHE22Q8NFJ8 381 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 DNAJB14Q8TBM8 379 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 NELL2Q99435 816 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 NANOGQ9H9S0 305 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 TRNAU1APQ9NX07 287 aaKnown RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ZNF624Q9P2J8 865 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 SLCO1B1Q9Y6L6 691 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 MYO1DO94832 1006 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 LRATO95237 230 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 TGFB1P01137 390 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 TNFP01375 233 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PEBP1P30086 187 aaKnown RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 CCR8P51685 355 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ATXN3P54252 364 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-203ENST00000371319 SPATS1Q496A3 300 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 SLC30A9Q6PML9 568 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 RNF111Q6ZNA4 994 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■■■■■ 40.9
SSBP3-203ENST00000371319 OR2A1Q8NGT9 310 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 NRG4Q8WWG1 115 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 CGREF1Q99674 301 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 AIF1LQ9BQI0 150 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 CHRDQ9H2X0 955 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 RHBGQ9H310 441 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 NT5DC2Q9H857 520 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 STOML1Q9UBI4 398 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 BCAP29Q9UHQ4 241 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 ANGPTL2Q9UKU9 493 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PCDHB11Q9Y5F2 797 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 COLEC10Q9Y6Z7 277 aa16.85■□□□□ 0.29
SSBP3-203ENST00000371319 PRUNE2Q8WUY3 3088 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 C15orf38-AP3S2A0A0A6YYH1 394 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 H7BY64 318 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 PRMT3O60678 531 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 KCNH1O95259 989 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 PRPS1L1P21108 318 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 TIA1P31483 386 aaKnown RBP eCLIP16.84■□□□□ 0.298e-7■■■■■ 30.6
SSBP3-203ENST00000371319 S100A3P33764 101 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 PTDSS1P48651 473 aaKnown RBP16.84■□□□□ 0.29
SSBP3-203ENST00000371319 EEFSECP57772 596 aaKnown RBP16.84■□□□□ 0.29
SSBP3-203ENST00000371319 SESN3P58005 492 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 PHEXP78562 749 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 SELPLGQ14242 412 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
SSBP3-203ENST00000371319 MAPKAPK3Q16644 382 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 GALNT18Q6P9A2 607 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 ARMCX6Q7L4S7 300 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 ARPINQ7Z6K5 226 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 ANKRD53Q8N9V6 530 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 GPR156Q8NFN8 814 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 JPH3Q8WXH2 748 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-203ENST00000371319 PRAP1Q96NZ9 151 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 OR52E6Q96RD3 313 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 OR51B5Q9H339 312 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 TCEAL2Q9H3H9 227 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-203ENST00000371319 TBC1D17Q9HA65 648 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 NMRK1Q9NWW6 199 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 MAN2B2Q9Y2E5 1009 aa16.84■□□□□ 0.29
SSBP3-203ENST00000371319 IGKV1-8A0A0C4DH67 115 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 C19orf67A6NJJ6 358 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 AKAP10O43572 662 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 DFNA5O60443 496 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 DNAJA2O60884 412 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 KLHL18O94889 574 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 ANP32DO95626 131 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 TBX6O95947 436 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-203ENST00000371319 THEGLP0DJG4 465 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 CXCR2P25025 360 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PXNP49023 591 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-203ENST00000371319 GSK3BP49841 420 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 CSNK1G2P78368 415 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PLIN5Q00G26 463 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PRDX1Q06830 199 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms