RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SIGLEC10Q96LC7 697 aa15.34■□□□□ 0.05
VMA21-202ENST00000370361 TRIM56Q9BRZ2 755 aaKnown RBP15.34■□□□□ 0.05
VMA21-202ENST00000370361 RNF32Q9H0A6 362 aa15.34■□□□□ 0.05
VMA21-202ENST00000370361 ZBTB20Q9HC78 741 aaPredicted RBP15.34■□□□□ 0.05
VMA21-202ENST00000370361 ZNF160Q9HCG1 818 aa15.34■□□□□ 0.05
VMA21-202ENST00000370361 CORO1CQ9ULV4 474 aaPredicted RBP15.34■□□□□ 0.05
VMA21-202ENST00000370361 SNX12Q9UMY4 172 aa15.34■□□□□ 0.05
VMA21-202ENST00000370361 MDC1Q14676 2089 aaKnown RBP15.34■□□□□ 0.05
VMA21-202ENST00000370361 IGHV1-45A0A0A0MS14 117 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 TRAV17A0A0B4J275 112 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 PABPN1LA6NDY0 278 aaKnown RBP15.33■□□□□ 0.04
VMA21-202ENST00000370361 GOLGA8MH3BSY2 632 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 NRP2O60462 931 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 NSA2O95478 260 aaKnown RBP15.33■□□□□ 0.04
VMA21-202ENST00000370361 PRR35P0CG20 571 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 COX6A1P12074 109 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 IMPA1P29218 277 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 GRK3P35626 688 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 TERF1P54274 439 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 SKP1P63208 163 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 CRYMQ14894 314 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 HSP90AA5PQ58FG0 334 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 VWA2Q5GFL6 755 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 SPANXN3Q5MJ09 141 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 RNASEH2BQ5TBB1 312 aaKnown RBP15.33■□□□□ 0.04
VMA21-202ENST00000370361 NIPAL1Q6NVV3 410 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 ZNF549Q6P9A3 640 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 MAMDC2Q7Z304 686 aaPredicted RBP15.33■□□□□ 0.04
VMA21-202ENST00000370361 BCORP1Q8N888 145 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 AMER3Q8N944 861 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 CAMKVQ8NCB2 501 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 FAR1Q8WVX9 515 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 METTL21AQ8WXB1 218 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 RUNDC3BQ96NL0 473 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 SLC30A3Q99726 388 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 YIPF2Q9BWQ6 316 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 ZNF700Q9H0M5 742 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 PARVBQ9HBI1 364 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 C19orf25Q9UFG5 118 aaPredicted RBP15.33■□□□□ 0.04
VMA21-202ENST00000370361 TEKT2Q9UIF3 430 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 POLEQ07864 2286 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 CNTRLQ7Z7A1 2325 aa15.33■□□□□ 0.04
VMA21-202ENST00000370361 LDLRP01130 860 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 HIST1H2AGP0C0S8 130 aaPredicted RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 HIST1H2ADP20671 130 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 IL10P22301 178 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 SOX11P35716 441 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 AP1S2P56377 157 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 ARG2P78540 354 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 Q0VFX4 171 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 ILF2Q12905 390 aaKnown RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 CUL1Q13616 776 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 KCTD19Q17RG1 926 aaPredicted RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 HKDC1Q2TB90 917 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 TMEM205Q6UW68 189 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 SYDE1Q6ZW31 735 aaPredicted RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 C17orf64Q86WR6 236 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 CNTN4Q8IWV2 1026 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 CPNE9Q8IYJ1 553 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 MYO1HQ8N1T3 1032 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 HAS2Q92819 552 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 HIST1H2AHQ96KK5 128 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 CNDP1Q96KN2 507 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 HIST1H2AJQ99878 128 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 HAUS8Q9BT25 410 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 H2AFJQ9BTM1 129 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 TUBB6Q9BUF5 446 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 STOX2Q9P2F5 926 aaPredicted RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 ERRFI1Q9UJM3 462 aaPredicted RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 PYCARDQ9ULZ3 195 aa15.32■□□□□ 0.04
VMA21-202ENST00000370361 MRPS2Q9Y399 296 aaKnown RBP15.32■□□□□ 0.04
VMA21-202ENST00000370361 MASP2O00187 686 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 CDK2AP1O14519 115 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 HAT1O14929 419 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 FOXS1O43638 330 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 ALOX12BO75342 701 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 WFS1O76024 890 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 HAUS5O94927 633 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
VMA21-202ENST00000370361 AGTR2P50052 363 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 TBPL1P62380 186 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 YBX1P67809 324 aaKnown RBP15.31■□□□□ 0.04
VMA21-202ENST00000370361 PIWIL4Q7Z3Z4 852 aaKnown RBP15.31■□□□□ 0.04
VMA21-202ENST00000370361 PRSS58Q8IYP2 241 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 TBC1D19Q8N5T2 526 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 GPATCH11Q8N954 259 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 PPFIBP2Q8ND30 876 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 GRHL3Q8TE85 626 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 ATL1Q8WXF7 558 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 LRRC39Q96DD0 335 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 TRIM54Q9BYV2 358 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 IARS2Q9NSE4 1012 aaKnown RBP15.31■□□□□ 0.04
VMA21-202ENST00000370361 ASIC3Q9UHC3 531 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 MKL2Q9ULH7 1088 aa15.31■□□□□ 0.04
VMA21-202ENST00000370361 A0A0A6YYC8 382 aaPredicted RBP15.3■□□□□ 0.04
VMA21-202ENST00000370361 H7BY64 318 aa15.3■□□□□ 0.04
VMA21-202ENST00000370361 I3L1I5 382 aaPredicted RBP15.3■□□□□ 0.04
VMA21-202ENST00000370361 DNALI1O14645 258 aaPredicted RBP15.3■□□□□ 0.04
VMA21-202ENST00000370361 UQCRHP07919 91 aa15.3■□□□□ 0.04
VMA21-202ENST00000370361 SLC35G6P0C7Q6 338 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms