RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 GSNP06396 782 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 COX7A2P14406 83 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.37
ECM1-202ENST00000369047 CDKN2CP42773 168 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 PREPP48147 710 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 NKG7Q16617 165 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 UGT8Q16880 541 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 RFX4Q33E94 735 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 C9orf64Q5T6V5 341 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 ANXA8L1Q5VT79 327 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 DOK6Q6PKX4 331 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 CAMKMTQ7Z624 323 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 ANKRD46Q86W74 232 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 HIPK1Q86Z02 1210 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 ERI1Q8IV48 349 aaKnown RBP12.71□□□□□ -0.37
ECM1-202ENST00000369047 PJA1Q8NG27 643 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 CHTF18Q8WVB6 975 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 NXPE3Q969Y0 559 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 NUS1Q96E22 293 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 WDR34Q96EX3 536 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 MTERF1Q99551 399 aaKnown RBP12.71□□□□□ -0.37
ECM1-202ENST00000369047 CARS2Q9HA77 564 aaKnown RBP12.71□□□□□ -0.37
ECM1-202ENST00000369047 TRIM39Q9HCM9 518 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 DDX18Q9NVP1 670 aaKnown RBP12.71□□□□□ -0.37
ECM1-202ENST00000369047 IFT80Q9P2H3 777 aaPredicted RBP12.71□□□□□ -0.37
ECM1-202ENST00000369047 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 BTNL2Q9UIR0 455 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 RPS6KA6Q9UK32 745 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 CORO2BQ9UQ03 480 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 MAGEB17A8MXT2 336 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 FOXE1O00358 373 aaPredicted RBP12.71□□□□□ -0.38
ECM1-202ENST00000369047 IL9P15248 144 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 MAGEA2P43356 314 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 CDH15P55291 814 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 WNT3P56703 355 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 PPP2R2BQ00005 443 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 GTF2H3Q13889 308 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 ELAVL3Q14576 367 aaKnown RBP12.71□□□□□ -0.38
ECM1-202ENST00000369047 RBBP5Q15291 538 aaKnown RBP12.71□□□□□ -0.38
ECM1-202ENST00000369047 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.38
ECM1-202ENST00000369047 CPZQ66K79 652 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 MED27Q6P2C8 311 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 SLCO4C1Q6ZQN7 724 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 MTSS1LQ765P7 747 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 C12orf40Q86WS4 652 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 ZNF555Q8NEP9 628 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 OR7G3Q8NG95 312 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 OR7A2PQ8NGA2 310 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 CXorf40BQ96DE9 158 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 WRAP53Q9BUR4 548 aaKnown RBP12.71□□□□□ -0.38
ECM1-202ENST00000369047 EFCAB11Q9BUY7 163 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 EHD1Q9H4M9 534 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 ITM2CQ9NQX7 267 aa12.71□□□□□ -0.38
ECM1-202ENST00000369047 KRT87PA6NCN2 255 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 VEGFDO43915 354 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 LILRB5O75023 590 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 TRMUO75648 421 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 ENGP17813 658 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 PDHA2P29803 388 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 GPR1P46091 355 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 BDKRB1P46663 353 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 HLCSP50747 726 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 VEZF1Q14119 521 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 VMACQ2NL98 169 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 ZC3H12BQ5HYM0 836 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 PAGE2BQ5JRK9 111 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 RBM48Q5RL73 367 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 GALNT18Q6P9A2 607 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 ZNF621Q6ZSS3 439 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 THAP5Q7Z6K1 395 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 CFAP206Q8IYR0 622 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 TERB1Q8NA31 727 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 SETD7Q8WTS6 366 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 GFM2Q969S9 779 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
ECM1-202ENST00000369047 MUS81Q96NY9 551 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 TUBA1CQ9BQE3 449 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 DUSP26Q9BV47 211 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 EBPLQ9BY08 206 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 DPEP2Q9H4A9 486 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 C3orf18Q9UK00 162 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 DYRK1BQ9Y463 629 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 PCDHB11Q9Y5F2 797 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 LAMA3Q16787 3333 aa12.7□□□□□ -0.38
ECM1-202ENST00000369047 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
ECM1-202ENST00000369047 SPINT1O43278 529 aa12.69□□□□□ -0.38
ECM1-202ENST00000369047 KCNK5O95279 499 aa12.69□□□□□ -0.38
ECM1-202ENST00000369047 CLIC3O95833 236 aa12.69□□□□□ -0.38
ECM1-202ENST00000369047 SOD1P00441 154 aa12.69□□□□□ -0.38
ECM1-202ENST00000369047 ANXA4P09525 319 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms