RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 MADCAM1Q13477 382 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 PCLAFQ15004 111 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 CYTH1Q15438 398 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 PRICKLE4Q2TBC4 344 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
SCNM1-202ENST00000368905 NAPEPLDQ6IQ20 393 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 SLC25A25Q6KCM7 469 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 TRNP1Q6NT89 227 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 SPATA19Q7Z5L4 167 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 VTCN1Q7Z7D3 282 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 GHDCQ8N2G8 530 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 DDHD1Q8NEL9 900 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 NFKBIDQ8NI38 313 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 ROBO4Q8WZ75 1007 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 BCL2L2Q92843 193 aaPredicted RBP9.68□□□□□ -0.86
SCNM1-202ENST00000368905 PHF21AQ96BD5 680 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 KLHL5Q96PQ7 755 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 FBXO44Q9H4M3 255 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 ECT2Q9H8V3 914 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 USP29Q9HBJ7 922 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 MLXIPLQ9NP71 852 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 PDP1Q9P0J1 537 aaPredicted RBP9.68□□□□□ -0.86
SCNM1-202ENST00000368905 APOBEC3BQ9UH17 382 aaKnown RBP9.68□□□□□ -0.86
SCNM1-202ENST00000368905 CDH7Q9ULB5 785 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 SLC12A4Q9UP95 1085 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 PTRH2Q9Y3E5 179 aaKnown RBP9.68□□□□□ -0.86
SCNM1-202ENST00000368905 V9GYQ6 96 aa9.68□□□□□ -0.86
SCNM1-202ENST00000368905 HELTA6NFD8 242 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 MGRN1O60291 552 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ATP2C2O75185 946 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 SPAG7O75391 227 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 RASSF9O75901 435 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 TNFRSF1AP19438 455 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 NCF2P19878 526 aaPredicted RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 PRPS1L1P21108 318 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 PTX3P26022 381 aaPredicted RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ADORA2BP29275 332 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 SERPINB1P30740 379 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ELK3P41970 407 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 BCAP31P51572 246 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ITGA1P56199 1179 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 WDR4P57081 412 aaKnown RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 YWHAGP61981 247 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 CDK16Q00536 496 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 NFYCQ13952 458 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 CST9LP1Q5W188 147 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 LINC00523Q86TU6 105 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ZFAND4Q86XD8 727 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 FSTL5Q8N475 847 aaPredicted RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 PQLC3Q8N755 202 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 NHLRC2Q8NBF2 726 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 CCNYQ8ND76 341 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 PCDH19Q8TAB3 1148 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 SELENOMQ8WWX9 145 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 SOCS4Q8WXH5 440 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ZCCHC14Q8WYQ9 949 aaKnown RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 GTF3AQ92664 365 aaKnown RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 OPN3Q9H1Y3 402 aaPredicted RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 OR52A5Q9H2C5 316 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 EPB41L1Q9H4G0 881 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 DHX35Q9H5Z1 703 aaKnown RBP9.67□□□□□ -0.86
SCNM1-202ENST00000368905 CHRAC1Q9NRG0 131 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 ARL8BQ9NVJ2 186 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 CMTM6Q9NX76 183 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 MPP6Q9NZW5 540 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 HSFX1Q9UBD0 423 aa9.67□□□□□ -0.86
SCNM1-202ENST00000368905 MANSC4A6NHS7 340 aaPredicted RBP9.66□□□□□ -0.86
SCNM1-202ENST00000368905 TYROBPO43914 113 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 DCTN3O75935 186 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 EPHX1P07099 455 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 SPARCP09486 303 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 LCP1P13796 627 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 GFAPP14136 432 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 TPSB2P20231 275 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 AGAP20933 346 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 CCND3P30281 292 aaPredicted RBP9.66□□□□□ -0.86
SCNM1-202ENST00000368905 FDFT1P37268 417 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 FEN1P39748 380 aaKnown RBP9.66□□□□□ -0.86
SCNM1-202ENST00000368905 MATKP42679 507 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 C1QTNF8P60827 252 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 CHRNEQ04844 493 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 TDGQ13569 410 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 BOP1Q14137 746 aaKnown RBP9.66□□□□□ -0.86
SCNM1-202ENST00000368905 TPSAB1Q15661 275 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 SGCBQ16585 318 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 SLC25A52Q3SY17 297 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 MSS51Q4VC12 460 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 PITRM1Q5JRX3 1037 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.66□□□□□ -0.86
SCNM1-202ENST00000368905 INO80CQ6PI98 192 aaPredicted RBP9.66□□□□□ -0.86
SCNM1-202ENST00000368905 ITIH5Q86UX2 942 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 C4orf33Q8N1A6 199 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 TMEM130Q8N3G9 435 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 OR2L3Q8NG85 312 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 OR5M1Q8NGP8 315 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 ZNF398Q8TD17 642 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 KCTD4Q8WVF5 259 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 KBTBD7Q8WVZ9 684 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 C5orf30Q96GV9 206 aa9.66□□□□□ -0.86
SCNM1-202ENST00000368905 SUSD3Q96L08 255 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms