RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CT55Q8WUE5 264 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCDC77Q9BR77 488 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 SLC7A5P2Q9GIP4 190 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 TMBIM4Q9HC24 238 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 IL17BQ9UHF5 180 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 PTBP2Q9UKA9 531 aaKnown RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 CROTQ9UKG9 612 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 MRPS18BQ9Y676 258 aaKnown RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 NBEAQ8NFP9 2946 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 IQANK1A0A1B0GTG1 560 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 MEN1O00255 615 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 TERTO14746 1132 aaKnown RBP14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 P2RX6O15547 441 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 MT-ND3P03897 115 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 GGT5P36269 586 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 HKDC1Q2TB90 917 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 LGSNQ5TDP6 509 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 SULT1C3Q6IMI6 304 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 RHBDD2Q6NTF9 364 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 TLDC1Q6P9B6 456 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 CYP4X1Q8N118 509 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 TCAIMQ8N3R3 496 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 RHEBL1Q8TAI7 183 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 SLC5A11Q8WWX8 675 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 MR1Q95460 341 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 MTBPQ96DY7 904 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 LRFN5Q96NI6 719 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 CHST8Q9H2A9 424 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 PADI1Q9ULC6 663 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 DYRK1BQ9Y463 629 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 AP1M2Q9Y6Q5 423 aa14.41□□□□□ -0.1
SMPDL3A-201ENST00000368440 GOLGA8RI6L899 631 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 LCMT2O60294 686 aaKnown RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 SRPX2O60687 465 aaPredicted RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 S100BP04271 92 aaPredicted RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCNYL3P0C7X3 344 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 DLSTP36957 453 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 BCL6P41182 706 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 SNRPNP63162 240 aaKnown RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 CXADRP78310 365 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 TCTE1Q5JU00 501 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 CDKL4Q5MAI5 379 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF517Q6ZMY9 492 aaPredicted RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCDC81Q6ZN84 652 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 VN1R4Q7Z5H5 301 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 TMPRSS11BQ86T26 416 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF740Q8NDX6 193 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 ABHD11Q8NFV4 315 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 GPN2Q9H9Y4 310 aaPredicted RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 ENAMQ9NRM1 1142 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 A0A1W2PPM1 405 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 FITM1A5D6W6 292 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 TCN2P20062 427 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 ITGAXP20702 1163 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 HRH2P25021 359 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCR8P51685 355 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 TMPRSS3P57727 454 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 RELAQ04206 551 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 PRTGQ2VWP7 1150 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 KLC3Q6P597 504 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 FAM198BQ6UWH4 519 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 TTLL10Q6ZVT0 673 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 TDRPQ86YL5 185 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 OR4K1Q8NGD4 311 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 ATP6V1G3Q96LB4 118 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 GBP5Q96PP8 586 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 MACROD1Q9BQ69 325 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 NDC1Q9BTX1 674 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 CUTCQ9NTM9 273 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 XPR1Q9UBH6 696 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 SRPK3Q9UPE1 567 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 RUVBL1Q9Y265 456 aaKnown RBP14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 PCDHGA4Q9Y5G9 962 aa14.4□□□□□ -0.1
SMPDL3A-201ENST00000368440 LOC400499M0QZD8 3231 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 LRRC14BA6NHZ5 514 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 TK2O00142 265 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 RGS16O15492 202 aaPredicted RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 CCNT2O60583 730 aaKnown RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 PRAMEF4O60810 478 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 STK16O75716 305 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 CAPN1P07384 714 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 HBQ1P09105 142 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 COL6A2P12110 1019 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 EPORP19235 508 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 VARSP26640 1264 aaKnown RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 HPDP32754 393 aaPredicted RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 CDC16Q13042 620 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 DNASE1L3Q13609 305 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 GRM7Q14831 915 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 SLC9A5Q14940 896 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 ARHGAP40Q5TG30 622 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 PRAMEF9Q5VWM5 478 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 NXPE4Q6UWF7 544 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 METTL27Q8N6F8 245 aaPredicted RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 CSNK1A1LQ8N752 337 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 TTC29Q8NA56 475 aaPredicted RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 UBTD2Q8WUN7 234 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 SCYL1Q96KG9 808 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 C10orf90Q96M02 699 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 CD244Q9BZW8 370 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms