RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SKIV2L2P42285 1042 aaKnown RBP14.09□□□□□ -0.15
CTSD-202ENST00000367196 YBX1P67809 324 aaKnown RBP14.09□□□□□ -0.15
CTSD-202ENST00000367196 Q0VFX4 171 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 SP140Q13342 867 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 KCNMB4Q86W47 210 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 FAR1Q8WVX9 515 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 METTL21AQ8WXB1 218 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 C8orf44Q96CB5 159 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 THAP11Q96EK4 314 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 SLC30A3Q99726 388 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 TRIM56Q9BRZ2 755 aaKnown RBP14.09□□□□□ -0.15
CTSD-202ENST00000367196 TMEM184CQ9NVA4 438 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 C19orf25Q9UFG5 118 aaPredicted RBP14.09□□□□□ -0.15
CTSD-202ENST00000367196 FBXO5Q9UKT4 447 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 NTNG1Q9Y2I2 539 aa14.09□□□□□ -0.15
CTSD-202ENST00000367196 MRPS2Q9Y399 296 aaKnown RBP14.09□□□□□ -0.15
CTSD-202ENST00000367196 TRAV17A0A0B4J275 112 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 H0YIG0 161 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 HAT1O14929 419 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 TTC4O95801 387 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 RNF224P0DH78 156 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 IMPA1P29218 277 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 GRK3P35626 688 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 TBPL1P62380 186 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 EEF1A2Q05639 463 aaKnown RBP14.08□□□□□ -0.16
CTSD-202ENST00000367196 PPP1R7Q15435 360 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 HSP90AA5PQ58FG0 334 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 CPNE9Q8IYJ1 553 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 MYO1HQ8N1T3 1032 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 AMER3Q8N944 861 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 NAT8LQ8N9F0 302 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 SUN3Q8TAQ9 357 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
CTSD-202ENST00000367196 CCDC138Q96M89 665 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 NAT9Q9BTE0 207 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 AARSD1Q9BTE6 412 aaKnown RBP14.08□□□□□ -0.16
CTSD-202ENST00000367196 TUBB6Q9BUF5 446 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 OLAHQ9NV23 265 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 TAS2R13Q9NYV9 303 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 STOX2Q9P2F5 926 aaPredicted RBP14.08□□□□□ -0.16
CTSD-202ENST00000367196 TEKT2Q9UIF3 430 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 MED16Q9Y2X0 877 aa14.08□□□□□ -0.16
CTSD-202ENST00000367196 UTP20O75691 2785 aaKnown RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 KCNE1BA0A087WTH5 132 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 LOC102723996A0A087X1L8 192 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 A0A0A6YYC8 382 aaPredicted RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 H7BY64 318 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 I3L1I5 382 aaPredicted RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 CES2O00748 559 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 SLC16A5O15375 505 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 KLHL18O94889 574 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 NSA2O95478 260 aaKnown RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 HIST1H2AGP0C0S8 130 aaPredicted RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 C8orf89P0DMQ9 161 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 HIST1H2ADP20671 130 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 SOX11P35716 441 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 CRYMQ14894 314 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 ZNF549Q6P9A3 640 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 CYHR1Q6ZMK1 362 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 PIWIL4Q7Z3Z4 852 aaKnown RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 PCGF5Q86SE9 256 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 LRRC56Q8IYG6 542 aaPredicted RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 CAMKVQ8NCB2 501 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 OR1N1Q8NGS0 311 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 HIST1H2AHQ96KK5 128 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 SIGLEC10Q96LC7 697 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 MAGEB10Q96LZ2 347 aaPredicted RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 PRAP1Q96NZ9 151 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 HIST1H2AJQ99878 128 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 H2AFJQ9BTM1 129 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 RNF32Q9H0A6 362 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 ZNF700Q9H0M5 742 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 IARS2Q9NSE4 1012 aaKnown RBP14.07□□□□□ -0.16
CTSD-202ENST00000367196 PTGFRNQ9P2B2 879 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 MKL2Q9ULH7 1088 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 NEU2Q9Y3R4 380 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 SVILO95425 2214 aa14.07□□□□□ -0.16
CTSD-202ENST00000367196 E2F3O00716 465 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 FOXS1O43638 330 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 HAUS5O94927 633 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 SLC35G6P0C7Q6 338 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 TNFSF10P50591 281 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 SKP1P63208 163 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 MPP1Q00013 466 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 MFSD4BQ5TF39 518 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 FAAH2Q6GMR7 532 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 TMEM205Q6UW68 189 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 C17orf64Q86WR6 236 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 ZC3H7AQ8IWR0 971 aaKnown RBP14.06□□□□□ -0.16
CTSD-202ENST00000367196 ARHGEF39Q8N4T4 335 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 SIRT6Q8N6T7 355 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 C2CD4AQ8NCU7 369 aaPredicted RBP14.06□□□□□ -0.16
CTSD-202ENST00000367196 HAS2Q92819 552 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 SLX1AQ9BQ83 275 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.169e-8■■■□□ 16.2
CTSD-202ENST00000367196 PARVBQ9HBI1 364 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms