RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 WWP2O00308 870 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CREG1O75629 220 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSD3B1P14060 373 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSD3B2P26439 372 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CCR10P46092 362 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLC11A1P49279 550 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF234Q14588 700 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 KIF18BQ86Y91 864 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 LSMEM2Q8N112 164 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CBARPQ8N350 705 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SRFBP1Q8NEF9 429 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 WFIKKN2Q8TEU8 576 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMBIM1Q969X1 311 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TSSK3Q96PN8 268 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF607Q96SK3 696 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SUV39H2Q9H5I1 410 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 RDH14Q9HBH5 336 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 GULP1Q9UBP9 304 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CLEC4AQ9UMR7 237 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 FCF1Q9Y324 198 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CD2P06729 351 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 RPS17P08708 135 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 NR2F6P10588 404 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 RPS2P15880 293 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 STOMP27105 288 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PDHA2P29803 388 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PIK3CBP42338 1070 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 AP2S1P53680 142 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PITPNAQ00169 270 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SSX2Q16385 188 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 IFI44LQ53G44 452 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TPRG1LQ5T0D9 272 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TPGS1Q6ZTW0 290 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 FAM220AQ7Z4H9 259 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PHYKPLQ8IUZ5 450 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PELI3Q8N2H9 469 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR9I1Q8NGQ6 314 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 WDR48Q8TAF3 677 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 KATNBL1Q9H079 304 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 THUMPD1Q9NXG2 353 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 MGAT4AQ9UM21 535 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 LYVE1Q9Y5Y7 322 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 ATAD5Q96QE3 1844 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PDE4DIPQ5VU43 2346 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SH3PXD2BA1X283 911 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 NT5C1B-RDH14C9J2C7 533 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TNFRSF11BO00300 401 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SERPINB7O75635 380 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PLATP00750 562 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 G6PDP11413 515 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSD17B2P37059 387 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CSKP41240 450 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 MTPNP58546 118 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 GK3PQ14409 553 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 DUOXA1Q1HG43 343 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 FAM76BQ5HYJ3 339 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PITRM1Q5JRX3 1037 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 SYVN1Q86TM6 617 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR4A15Q8NGL6 344 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 MAFIPQ8WZ33 124 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF514Q96K75 400 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 CNDP2Q96KP4 475 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 HERC2P3Q9BVR0 1158 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TPK1Q9H3S4 243 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 LIN28AQ9H9Z2 209 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 TM9SF3Q9HD45 589 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 PAK6Q9NQU5 681 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 RASSF1Q9NS23 344 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSPB11Q9Y547 144 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 OAS3Q9Y6K5 1087 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 ARFGEF1Q9Y6D6 1849 aa5.22□□□□□ -1.57
CDC42BPA-204ENST00000366767 MROH6A6NGR9 719 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 PITPNM1O00562 1244 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 CHST10O43529 356 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 IGLV3-25P01717 112 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 TRBC1P01850 177 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 C1QAP02745 245 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 PSMA1P25786 263 aaKnown RBP5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 CST5P28325 142 aaPredicted RBP5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 ALDH9A1P49189 494 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 SH3BP2P78314 561 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 CDKL1Q00532 357 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 CHIT1Q13231 466 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 FAM174BQ3ZCQ3 159 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 SPIN4Q56A73 249 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 FBXL19Q6PCT2 694 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 DEFB128Q7Z7B8 93 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 PHF10Q8WUB8 498 aaKnown RBP5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 TNFAIP8L1Q8WVP5 186 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 METTL2AQ96IZ6 378 aaKnown RBP5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 EFCAB11Q9BUY7 163 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 TRPC4Q9UBN4 977 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 PCTPQ9UKL6 214 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 YIPF1Q9Y548 306 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 MRPL42Q9Y6G3 142 aaKnown RBP5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 LOC730098B7Z3J9 87 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 MANBAO00462 879 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 ACOT8O14734 319 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 MAGEB3O15480 346 aa5.21□□□□□ -1.57
CDC42BPA-204ENST00000366767 LDB2O43679 373 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms