RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TSPYL5Q86VY4 417 aaPredicted RBP19.04■□□□□ 0.64
TRIM58-201ENST00000366481 ST13P5Q8NFI4 369 aaPredicted RBP19.04■□□□□ 0.64
TRIM58-201ENST00000366481 OR5H6Q8NGV6 325 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 SKA2Q8WVK7 121 aaPredicted RBP19.04■□□□□ 0.64
TRIM58-201ENST00000366481 SLC6A13Q9NSD5 602 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 CCDC182A6NF36 153 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 SLC38A8A6NNN8 435 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 OR7A17O14581 309 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 COCHO43405 550 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 C10orf111Q8N326 155 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 TP53I13Q8NBR0 393 aaPredicted RBP19.04■□□□□ 0.64
TRIM58-201ENST00000366481 TMCO6Q96DC7 493 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 ST6GAL2Q96JF0 529 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 LATS2Q9NRM7 1088 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 PTPRDP23468 1912 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 EFNA1P20827 205 aaPredicted RBP19.04■□□□□ 0.64
TRIM58-201ENST00000366481 AQP1P29972 269 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 CXCR4P61073 352 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 ARF5P84085 180 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 GTF2H2Q13888 395 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 GTF2H2CQ6P1K8 395 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 DOK6Q6PKX4 331 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 NOXA1Q86UR1 476 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 CYP4Z2PQ8N1L4 340 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 CNPPD1Q9BV87 410 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 IMPAD1Q9NX62 359 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 ELOVL2Q9NXB9 296 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 COQ3Q9NZJ6 369 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF490Q9ULM2 529 aaPredicted RBP19.04■□□□□ 0.64
TRIM58-201ENST00000366481 M0R082 166 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 M0R129 80 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 OR1D2P34982 312 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 SLC11A2P49281 568 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 NPRL3Q12980 569 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 FXNQ16595 210 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 CPSF6Q16630 551 aaKnown RBP eCLIP19.03■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF648Q5T619 568 aaPredicted RBP19.03■□□□□ 0.64
TRIM58-201ENST00000366481 CCDC28AQ8IWP9 274 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 DBF4BQ8NFT6 615 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 SNAPC3Q92966 411 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 CCDC115Q96NT0 180 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 TSSK3Q96PN8 268 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 DYRK4Q9NR20 520 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 TAS2R16Q9NYV7 291 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 H3BNC9 293 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 IGLV3-27P01718 113 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 FKBP1BP68106 108 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 FAM189BP81408 668 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 SMARCB1Q12824 385 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 KEAP1Q14145 624 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 PROX2Q3B8N5 592 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 ZC3H12BQ5HYM0 836 aaKnown RBP19.03■□□□□ 0.64
TRIM58-201ENST00000366481 CAPN13Q6MZZ7 669 aaPredicted RBP19.03■□□□□ 0.64
TRIM58-201ENST00000366481 GPR149Q86SP6 731 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 BCL7CQ8WUZ0 217 aaPredicted RBP19.03■□□□□ 0.64
TRIM58-201ENST00000366481 RNF186Q9NXI6 227 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 FNIP2Q9P278 1114 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 DNMT3LQ9UJW3 386 aa19.03■□□□□ 0.64
TRIM58-201ENST00000366481 FABP3P05413 133 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 HOXB8P17481 243 aaPredicted RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 DNAJA1P31689 397 aaKnown RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 S100A3P33764 101 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 TTPAP49638 278 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 UGT2B15P54855 530 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 CAMK2GQ13555 558 aaPredicted RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 FUT10Q6P4F1 479 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 PRR23CQ6ZRP0 262 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF605Q86T29 641 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 RNF175Q8N4F7 328 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 CAMKK1Q8N5S9 505 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 KIAA1958Q8N8K9 716 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 SIMC1Q8NDZ2 872 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 OR52J3Q8NH60 311 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 FCGR1BQ92637 280 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 PPP3R2Q96LZ3 170 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 OLA1Q9NTK5 396 aaKnown RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 ANKRD28O15084 1053 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 FFAR2O15552 330 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 KRT6AP02538 564 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 KRT6BP04259 564 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 ACVR2AP27037 513 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 CRISP3P54108 245 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 MXD1Q05195 221 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 TRIM71Q2Q1W2 868 aaKnown RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 INO80DQ53TQ3 878 aaPredicted RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 FAM217AQ8IXS0 508 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 TMEM132CQ8N3T6 1108 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 WFDC5Q8TCV5 224 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 MAGEH1Q9H213 219 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 HEBP1Q9NRV9 189 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 OGDHLQ9ULD0 1010 aa19.02■□□□□ 0.64
TRIM58-201ENST00000366481 SAMD4AQ9UPU9 718 aaKnown RBP19.02■□□□□ 0.64
TRIM58-201ENST00000366481 SLC25A14O95258 325 aaPredicted RBP19.02■□□□□ 0.63
TRIM58-201ENST00000366481 PRAMEF1O95521 474 aa19.02■□□□□ 0.63
TRIM58-201ENST00000366481 RHOAP61586 193 aa19.02■□□□□ 0.63
TRIM58-201ENST00000366481 PLD1Q13393 1074 aa19.02■□□□□ 0.63
TRIM58-201ENST00000366481 ARHGEF7Q14155 803 aa19.02■□□□□ 0.63
TRIM58-201ENST00000366481 TAF12Q16514 161 aa19.02■□□□□ 0.63
TRIM58-201ENST00000366481 ZMAT1Q5H9K5 638 aa19.02■□□□□ 0.63
TRIM58-201ENST00000366481 NATD1Q8N6N6 113 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms