RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 C8orf89P0DMQ9 161 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 ICAM2P13598 275 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 TFEBP19484 476 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 MC4RP32245 332 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 ANP32AP39687 249 aaKnown RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 ARF3P61204 181 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 KLHL30Q0D2K2 578 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 SF1Q15637 639 aaKnown RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 TMEM211Q6ICI0 200 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 RANBP10Q6VN20 620 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 CPEB2Q7Z5Q1 589 aaKnown RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 CXorf67Q86X51 503 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 MAP7D3Q8IWC1 876 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 CLYBLQ8N0X4 340 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 KIF2BQ8N4N8 673 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 TMEM178AQ8NBL3 297 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR52N2Q8NGI0 321 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR2L8Q8NGY9 312 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 LKAAEAR1Q8TD35 194 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 ELMO1Q92556 727 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 SLCO2A1Q92959 643 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 DNAJC1Q96KC8 554 aaKnown RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 CYTH2Q99418 400 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 MIPEPQ99797 713 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 PLEKHF2Q9H8W4 249 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 KCNK13Q9HB14 408 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 PNPLA3Q9NST1 481 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 C14orf105Q9NVL8 296 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 IMPACTQ9P2X3 320 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 Q9UFV3 132 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 TEKT2Q9UIF3 430 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 NENFQ9UMX5 172 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A087X0T9 212 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 IGKV1-8A0A0C4DH67 115 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A1B0GTH6 734 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 C5orf60A6NFR6 353 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 C2orf81A6NN90 581 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF487B1APH4 448 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 TARM1B6A8C7 271 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 PPP1R12AO14974 1030 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR1I1O60431 355 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 CDC40O60508 579 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 STATHP02808 62 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 TPM2P07951 284 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 FAM228BP0C875 321 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 GLI4P10075 376 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 CD53P19397 219 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 ITGALP20701 1170 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 ARHGAP25P42331 645 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 KIR2DL3P43628 341 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 UBE2HP62256 183 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 OC90Q02509 493 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 MPP3Q13368 585 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 MEP1AQ16819 746 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 MUM1Q2TAK8 710 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 FIGNQ5HY92 759 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 UNC5DQ6UXZ4 953 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 PRSS41Q7RTY9 318 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 ANKRD37Q7Z713 158 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 SULF2Q8IWU5 870 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR2L3Q8NG85 312 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR5M9Q8NGP3 310 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 HEXDCQ8WVB3 486 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZUFSPQ96AP4 578 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 MMABQ96EY8 250 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 CABS1Q96KC9 395 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 PACSIN1Q9BY11 444 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 TP63Q9H3D4 680 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 MKKSQ9NPJ1 570 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 SMARCAL1Q9NZC9 954 aa7.97□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR2A25A4D2G3 310 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR51F1A6NGY5 319 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 SMAD7O15105 426 aaKnown RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 CCR7P32248 378 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 NKX6-1P78426 367 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 GPR33Q49SQ1 333 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 CT47A1Q5JQC4 288 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 LRRC8BQ6P9F7 803 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZNF449Q6P9G9 518 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 MFSD7Q6UXD7 560 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 TAS2R42Q7RTR8 314 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 PID1Q7Z2X4 250 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 RFX6Q8HWS3 928 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC22A15Q8IZD6 547 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 EID3Q8N140 333 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR2A1Q8NGT9 310 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 GOT1L1Q8NHS2 421 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 CFAP61Q8NHU2 1237 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 TFB1MQ8WVM0 346 aaKnown RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 TMEM125Q96AQ2 219 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 TTYH2Q9BSA4 534 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 DEFB127Q9H1M4 99 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 CDCP1Q9H5V8 836 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRIM45Q9H8W5 580 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 VPS37BQ9H9H4 285 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 INTS7Q9NVH2 962 aaKnown RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 KLHL8Q9P2G9 620 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 RUVBL2Q9Y230 463 aaKnown RBP7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 LIPGQ9Y5X9 500 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms