RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 NR1D2Q14995 579 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SMTNL2Q2TAL5 461 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 PLEKHA7Q6IQ23 1121 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 IRF2BP2Q7Z5L9 587 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CAND1Q86VP6 1230 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 NRSN1Q8IZ57 195 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CACNA2D3Q8IZS8 1091 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 ANKRD20A12PQ8NF67 263 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 OR4D9Q8NGE8 314 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 HSPH1Q92598 858 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 DPF1Q92782 380 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 OR2M4Q96R27 311 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 ERGIC2Q96RQ1 377 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 NUDCD1Q96RS6 583 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 EIF3CQ99613 913 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CTRCQ99895 268 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SEMA3CQ99985 751 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SYT11Q9BT88 431 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZWILCHQ9H900 591 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 NOD2Q9HC29 1040 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 ETNK2Q9NVF9 386 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 GEMIN8Q9NWZ8 242 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 TRNAU1APQ9NX07 287 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 OCIAD1Q9NX40 245 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SLC39A1Q9NY26 324 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 MYO1AQ9UBC5 1043 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CNOT8Q9UFF9 292 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 LIMA1Q9UHB6 759 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 PHTF1Q9UMS5 762 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SLC17A4Q9Y2C5 497 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 A0A1W2PQ67 120 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 CGB1A6NKQ9 187 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 LRRC53A6NM62 1247 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMEM233B4DJY2 109 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 M0R3H8 397 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 INPP4BO15327 924 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 NKX2-8O15522 239 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZW10O43264 779 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 DUX1O43812 170 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 RAD1O60671 282 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 LRCH4O75427 683 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 USP1O94782 785 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 INMTO95050 263 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 PGLSO95336 258 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 EML2O95834 649 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SOD1P00441 154 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 CCDC172P0C7W6 258 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 THRAP10827 490 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ATP1A3P13637 1013 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 NFKBIAP25963 317 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 IL1R2P27930 398 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 EPHA3P29320 983 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 PRKAR1BP31321 381 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 HSPA9P38646 679 aaKnown RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 MMP13P45452 471 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 MAPK9P45984 424 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SUMO3P55854 103 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 POLE2P56282 527 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SUMO2P61956 95 aaKnown RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 HOXA4Q00056 320 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 MYL5Q02045 173 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SRSF1Q07955 248 aaKnown RBP eCLIP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 TRA2AQ13595 282 aaKnown RBP eCLIP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 IGFBP7Q16270 282 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ASIC2Q16515 512 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 PYCR3Q53H96 274 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 DCAF12Q5T6F0 453 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ARMC12Q5T9G4 340 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 MARC1Q5VT66 337 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 RNF220Q5VTB9 566 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 CACHD1Q5VU97 1274 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 LRRC66Q68CR7 880 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 TXNRD3NBQ6F5E7 133 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SASS6Q6UVJ0 657 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMCO3Q6UWJ1 677 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 KIRREL2Q6UWL6 708 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 NAPRTQ6XQN6 538 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 CHST15Q7LFX5 561 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 APTXQ7Z2E3 356 aaKnown RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 TECPR1Q7Z6L1 1165 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 BBS5Q8N3I7 341 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ATPAF2Q8N5M1 289 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 CCDC112Q8NEF3 446 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 OR56A3Q8NH54 315 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 OR10G6Q8NH81 332 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF564Q8TBZ8 553 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SLC37A2Q8TED4 501 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 NSMCE1Q8WV22 266 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 IPCEF1Q8WWN9 437 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF653Q96CK0 615 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 AP2M1Q96CW1 435 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF599Q96NL3 588 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 CSPG4P5Q96PW8 444 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 MGME1Q9BQP7 344 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 DDA1Q9BW61 102 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 B3GNT4Q9C0J1 378 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ABCG8Q9H221 673 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 HSD3B7Q9H2F3 369 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 HAUS4Q9H6D7 363 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 GPN2Q9H9Y4 310 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms