RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SLITRK2Q9H156 845 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 ARNT2Q9HBZ2 717 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 ZBTB26Q9HCK0 441 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 PRSS51A0A1B0GVH4 220 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 LATO43561 262 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 ASGR2P07307 311 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
CTR9-201ENST00000361367 DIO3P55073 304 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 DSTNP60981 165 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 DUOXA1Q1HG43 343 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 KHDC1Q4VXA5 237 aaKnown RBP13.44□□□□□ -0.26
CTR9-201ENST00000361367 LIPIQ6XZB0 460 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 HSD11B1LQ7Z5J1 315 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 AMIGO1Q86WK6 493 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 CBR4Q8N4T8 237 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 FAM120CQ9NX05 1096 aaKnown RBP13.44□□□□□ -0.26
CTR9-201ENST00000361367 NUMBLQ9Y6R0 609 aa13.44□□□□□ -0.26
CTR9-201ENST00000361367 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 H3BNC9 293 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 HRH2P25021 359 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 SCARB2Q14108 478 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 OR4D1Q15615 310 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 TAZQ16635 292 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 EGFLAMQ63HQ2 1017 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 DPPA4Q7L190 304 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 SYVN1Q86TM6 617 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 MOCOSQ96EN8 888 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 SLC7A8Q9UHI5 535 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 PTPRZ1P23471 2315 aaPredicted RBP13.43□□□□□ -0.26
CTR9-201ENST00000361367 LOC100506127A0A0U1RQW1 187 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 NELFEP18615 380 aaKnown RBP13.43□□□□□ -0.26
CTR9-201ENST00000361367 AOC1P19801 751 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 CCNA2P20248 432 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 RABIFP47224 123 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 CSNK1DP48730 415 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 HYAL2Q12891 473 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 DPY19L2P1Q6NXN4 242 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 ISCA2Q86U28 154 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 NEUROD4Q9HD90 331 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 HCN3Q9P1Z3 774 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 FAM25AB3EWG3 89 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 FAM25CB3EWG5 89 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 FAM25GB3EWG6 89 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
CTR9-201ENST00000361367 ALPPP05187 535 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
CTR9-201ENST00000361367 DUSP3P51452 185 aaPredicted RBP13.43□□□□□ -0.26
CTR9-201ENST00000361367 ABATP80404 500 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 FAM92BQ6ZTR7 304 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 TMIEQ8NEW7 156 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 NOL6Q9H6R4 1146 aaKnown RBP13.43□□□□□ -0.26
CTR9-201ENST00000361367 CTPS2Q9NRF8 586 aa13.43□□□□□ -0.26
CTR9-201ENST00000361367 EIF3FO00303 357 aaPredicted RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 C8orf89P0DMQ9 161 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 MTHFD1P11586 935 aaKnown RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 TIMP2P16035 220 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 CCKBRP32239 447 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 DOC2AQ14183 400 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 TDHQ8IZJ6 230 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 HHIPQ96QV1 700 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 ADAM30Q9UKF2 790 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 CEP290O15078 2479 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 FAM221BA6H8Z2 402 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 ZNF860A6NHJ4 632 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 STX11O75558 287 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 TTKP33981 857 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 VSX2P58304 361 aaPredicted RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 NOXRED1Q6NXP6 359 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 ANKRD54Q6NXT1 300 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 SMIM14Q96QK8 99 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 TPT1P8Q9HAU6 139 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 RASSF1Q9NS23 344 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 DDX28Q9NUL7 540 aaKnown RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 P2RX2Q9UBL9 471 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 LHX3Q9UBR4 397 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 GSTK1Q9Y2Q3 226 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 TPST2O60704 377 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 KCNJ13O60928 360 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 NME6O75414 186 aaPredicted RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 CCDC159P0C7I6 412 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 NR2F6P10588 404 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 RPS3P23396 243 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTR9-201ENST00000361367 RPS9P46781 194 aaKnown RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 GPR150Q8NGU9 434 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 PIH1D2Q8WWB5 315 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 FUBP1Q96AE4 644 aaKnown RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms