RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 KIAA1161Q6NSJ0 714 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ZBTB49Q6ZSB9 765 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 L3MBTL4Q8NA19 623 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 PROKR1Q8TCW9 393 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF514Q96K75 400 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 HAUS8Q9BT25 410 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 DCUN1D5Q9BTE7 237 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ASIC5Q9NY37 505 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 EGFL7Q9UHF1 273 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF490Q9ULM2 529 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 FAF1Q9UNN5 650 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 EIF3LQ9Y262 564 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 CA5BQ9Y2D0 317 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 MYRFQ9Y2G1 1151 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 IGHV1OR15-9A0A0B4J2B8 117 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 SH3PXD2BA1X283 911 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 SERTM1A2A2V5 107 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 H3BNH8 94 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 CLIC3O95833 236 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 GNPDA1P46926 289 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 TMED10P49755 219 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 TXNL4AP83876 142 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 IRF4Q15306 451 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 ZXDCQ2QGD7 858 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 ZFAND4Q86XD8 727 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 KLHDC8AQ8IYD2 350 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC22A15Q8IZD6 547 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 OR2T34Q8NGX1 318 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 LRRC58Q96CX6 371 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 TEX37Q96LM6 180 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 CCDC138Q96M89 665 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 OSBPL11Q9BXB4 747 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 C1QTNF2Q9BXJ5 285 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 WSB2Q9NYS7 404 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 SNX6Q9UNH7 406 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 NOX1Q9Y5S8 564 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 EML5Q05BV3 1969 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 ABCA7Q8IZY2 2146 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 LRRC72A6NJI9 287 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 IGLV3-19P01714 112 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 CATP04040 527 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 CD6P30203 668 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 NEK2P51955 445 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF33BQ06732 778 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF658BQ4V348 819 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 CYP20A1Q6UW02 462 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 TMEM105Q8N8V8 129 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 FOPNLQ96NB1 174 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 ATAD3AQ9NVI7 634 aa13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 RBMX2Q9Y388 322 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-201ENST00000359867 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 TMEM202A6NGA9 273 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 FFAR3O14843 346 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 GPR42O15529 346 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 UGDHO60701 494 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 SLC2A4P14672 509 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 JAK1P23458 1154 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 ABRQ12979 859 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 IMPG1Q17R60 797 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 RFTN2Q52LD8 501 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 CLVS1Q8IUQ0 354 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 ZNF786Q8N393 782 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 CAMKK1Q8N5S9 505 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 TP53I13Q8NBR0 393 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 FBXO15Q8NCQ5 510 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 LINC00615Q96LM1 132 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 CNOT11Q9UKZ1 510 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 C17orf113A0A1B0GUU1 675 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 TCRBV3S1A0A5B6 114 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 FUOMA2VDF0 154 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 ARHGEF33A8MVX0 844 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 H0Y8X5 98 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 FXYD1O00168 92 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 ANKRD28O15084 1053 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 VEGFDO43915 354 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 ZNF217O75362 1048 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 STAMBPO95630 424 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 G6PDP11413 515 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 HSD17B1P14061 328 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 IL12AP29459 219 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 SLC7A1P30825 629 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 ENTPD1P49961 510 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 CLDN2P57739 230 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 DMPKQ09013 629 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 CAPRIN1Q14444 709 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 INPP5AQ14642 412 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 NEK5Q6P3R8 708 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 BORAQ6PGQ7 559 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 DHFR2Q86XF0 187 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 LGR4Q9BXB1 951 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 LRTM1Q9HBL6 345 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 PNPLA3Q9NST1 481 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 GPR34Q9UPC5 381 aa13.39□□□□□ -0.27
CSNK1E-201ENST00000359867 DMDP11532 3685 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms