RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 HSDL2Q6YN16 418 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 CLEC20AQ6ZU45 233 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 BEND4Q6ZU67 534 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF227Q86WZ6 799 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 CMTM7Q96FZ5 175 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 GTPBP2Q9BX10 602 aaKnown RBP17.9■□□□□ 0.46
SHANK1-202ENST00000359082 TULP2O00295 520 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 H1F0P07305 194 aaKnown RBP17.9■□□□□ 0.46
SHANK1-202ENST00000359082 DGKQP52824 942 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 GOLGA7Q7Z5G4 137 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 PSKH2Q96QS6 385 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 CLCNKAP51800 687 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 C14orf166Q9Y224 244 aaKnown RBP17.89■□□□□ 0.45
SHANK1-202ENST00000359082 RBM47A0AV96 593 aaKnown RBP17.89■□□□□ 0.45
SHANK1-202ENST00000359082 C9J4A7 227 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 HMGN1P05114 100 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 FUT2Q10981 343 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 SOWAHAQ2M3V2 549 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 KLHDC10Q6PID8 442 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 LRRC70Q7Z2Q7 622 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 CLEC4DQ8WXI8 215 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 FCRL5Q96RD9 977 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 SLC32A1Q9H598 525 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 SDHAF3Q9NRP4 125 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
SHANK1-202ENST00000359082 GPR89AB7ZAQ6 455 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 GPR89BP0CG08 455 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 PRKCZQ05513 592 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 PLEKHG6Q3KR16 790 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF611Q8N823 705 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF565Q8N9K5 539 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 AQP11Q8NBQ7 271 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 OR4K17Q8NGC6 315 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 TTTY10Q9BZA0 68 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 OAZ3Q9UMX2 235 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 GJA1P17302 382 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 NUDT6P53370 316 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 MAD2L1BPQ15013 274 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-202ENST00000359082 KLHL6Q8WZ60 621 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 CCSER2Q9H7U1 834 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 PCDHGB1Q9Y5G3 927 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 VIPR1P32241 457 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 SMSP52788 366 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 TUBA4AP68366 448 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 CREB5Q02930 508 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 LBX2Q6XYB7 198 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 DNAJB7Q7Z6W7 309 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-202ENST00000359082 NDC1Q9BTX1 674 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 SLC2A6Q9UGQ3 507 aa17.89■□□□□ 0.45
SHANK1-202ENST00000359082 ATRNL1Q5VV63 1379 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 NRP1O14786 923 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 DPYSL2Q16555 572 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 CDKL4Q5MAI5 379 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 OR10Q1Q8NGQ4 319 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 ORAI3Q9BRQ5 295 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM109Q9BVC6 243 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 C14orf105Q9NVL8 296 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 J3KR12 359 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 E2F3O00716 465 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 GRIA1P42261 906 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 CPNE8Q86YQ8 564 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF700Q9H0M5 742 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 ZDHHC2Q9UIJ5 367 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM98Q9Y2Y6 226 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 SLC22A1O15245 554 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 COQ9O75208 318 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 IL33O95760 270 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 MATN1P21941 496 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 ADAM15Q13444 863 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 WDR77Q9BQA1 342 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-202ENST00000359082 DKKL1Q9UK85 242 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 CDC14AQ9UNH5 594 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 SMIM30A4D0T7 59 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 A8MT66 165 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 BLOC1S5-TXNDC5H3BN57 136 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 PRKD3O94806 890 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 GBAP04062 536 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 FOXN2P32314 431 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 EEFSECP57772 596 aaKnown RBP17.88■□□□□ 0.45
SHANK1-202ENST00000359082 EIF5AP63241 154 aaKnown RBP17.88■□□□□ 0.45
SHANK1-202ENST00000359082 MPP2Q14168 576 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 KCTD9Q7L273 389 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 LRRTM4Q86VH4 590 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 OR4E2Q8NGC2 313 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM168Q9H0V1 697 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 METTL7AQ9H8H3 244 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 LOC100130705A0A1B0GUX0 176 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 B4GALT2O60909 372 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM63AO94886 807 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 MLLT10P55197 1068 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 ARHGAP40Q5TG30 622 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 SLC25A25Q6KCM7 469 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 ANKRD26P1Q6NSI1 321 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 DNM1P34Q6PK57 102 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 TMED4Q7Z7H5 227 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 CAMKVQ8NCB2 501 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 SCGB3A2Q96PL1 93 aa17.88■□□□□ 0.45
SHANK1-202ENST00000359082 CXorf49A8MYA2 514 aaPredicted RBP17.87■□□□□ 0.45
SHANK1-202ENST00000359082 UFM1P61960 85 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms