RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PMS2P1A4D2B8 440 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 HYAL3O43820 417 aaPredicted RBP14.24□□□□□ -0.13
CCNE1-202ENST00000357943 NPHS1O60500 1241 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 CLDN9O95484 217 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 OTCP00480 354 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 SERPINE1P05121 402 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 CCL4P13236 92 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 HGFP14210 728 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 EZRP15311 586 aaKnown RBP14.24□□□□□ -0.13
CCNE1-202ENST00000357943 GRK3P35626 688 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 ID4P47928 161 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 GABRA4P48169 554 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 GYS2P54840 703 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 REEP5Q00765 189 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 ARL13AQ5H913 290 aaPredicted RBP14.24□□□□□ -0.13
CCNE1-202ENST00000357943 LIPJQ5W064 366 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 FRMPD2BQ6IN97 320 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 TMPRSS7Q7RTY8 843 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 MILR1Q7Z6M3 343 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 SYVN1Q86TM6 617 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 L3MBTL4Q8NA19 623 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 FAM76AQ8TAV0 307 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 AGAP11Q8TF27 550 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 LIN37Q96GY3 246 aaPredicted RBP14.24□□□□□ -0.13
CCNE1-202ENST00000357943 CNDP1Q96KN2 507 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 OR2A5Q96R48 311 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 ZNF382Q96SR6 550 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 ZFYVE21Q9BQ24 234 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 AIF1LQ9BQI0 150 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 STRADBQ9C0K7 418 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 C20orf27Q9GZN8 174 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 DRC3Q9H069 523 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 ZNF395Q9H8N7 513 aaPredicted RBP14.24□□□□□ -0.13
CCNE1-202ENST00000357943 TNFRSF12AQ9NP84 129 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 SIDT1Q9NXL6 827 aaKnown RBP14.24□□□□□ -0.13
CCNE1-202ENST00000357943 SPTBN4Q9H254 2564 aa14.24□□□□□ -0.13
CCNE1-202ENST00000357943 EFCAB7A8K855 629 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 TMX2-CTNND1H3BSU7 103 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 MAP3K7O43318 606 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ITM2AO43736 263 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 OR1F1O43749 312 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 UGDHO60701 494 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 OR4F21O95013 312 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 BCL6P41182 706 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 NAA20P61599 178 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 RCN2Q14257 317 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 RBBP5Q15291 538 aaKnown RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 GPR19Q15760 415 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 CPSF6Q16630 551 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ADNP2Q6IQ32 1131 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 GRHL2Q6ISB3 625 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 RAB11FIP2Q7L804 512 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 MCATQ8IVS2 390 aaKnown RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 CACTIN-AS1Q8N1I8 211 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 GALNT15Q8N3T1 639 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 BMPERQ8N8U9 685 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ANKRD53Q8N9V6 530 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 DYDC1Q8WWB3 177 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 TRMOQ9BU70 441 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 EFCAB11Q9BUY7 163 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 SARGQ9BW04 601 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 MID1IP1Q9NPA3 183 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ZNF490Q9ULM2 529 aaPredicted RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 LOXL2Q9Y4K0 774 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 HEATR5BQ9P2D3 2071 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 KCNE1BA0A087WTH5 132 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 LOC105369274A0A096LPK9 316 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 LOC102723532A0A0G2JNH3 316 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 TRBC2A0A5B9 178 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 H2AFYO75367 372 aaKnown RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ESRRBO95718 433 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ITIH1P19827 911 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 CXCR2P25025 360 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 HNF4AP41235 474 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 FOXA1P55317 472 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 RPS15AP62244 130 aaKnown RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 RELAQ04206 551 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 FOXM1Q08050 763 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 BST1Q10588 318 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 COL9A2Q14055 689 aaPredicted RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ZC3H12BQ5HYM0 836 aaKnown RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 PAGE2BQ5JRK9 111 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 TMTC4Q5T4D3 741 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 TMIGD1Q6UXZ0 262 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 GPRIN3Q6ZVF9 776 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 CUZD1Q86UP6 607 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 OR4N4Q8N0Y3 316 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 KRT78Q8N1N4 520 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ARFGAP2Q8N6H7 521 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 CDYL2Q8N8U2 506 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 ZNF501Q96CX3 271 aaPredicted RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 KCNA7Q96RP8 456 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 MANSC1Q9H8J5 431 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 APMAPQ9HDC9 416 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 FGF21Q9NSA1 209 aa14.23□□□□□ -0.13
CCNE1-202ENST00000357943 AKAP7Q9P0M2 348 aaPredicted RBP14.23□□□□□ -0.13
CCNE1-202ENST00000357943 TMEM150CB9EJG8 249 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms