RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAPN9-202ENST00000354537 C10orf62Q5T681 223 aaPredicted RBP11.06□□□□□ -0.64
CAPN9-202ENST00000354537 ARMC12Q5T9G4 340 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 RSBN1Q5VWQ0 802 aaPredicted RBP11.06□□□□□ -0.64
CAPN9-202ENST00000354537 VTCN1Q7Z7D3 282 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 ZNF605Q86T29 641 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 HEATR4Q86WZ0 1026 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 ZNF280BQ86YH2 543 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 UBQLNLQ8IYU4 475 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 ST13P5Q8NFI4 369 aaPredicted RBP11.06□□□□□ -0.64
CAPN9-202ENST00000354537 PIH1D2Q8WWB5 315 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 UBE2FQ969M7 185 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 ERLEC1Q96DZ1 483 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 DOHHQ9BU89 302 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 RACGAP1Q9H0H5 632 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 CNOT2Q9NZN8 540 aaKnown RBP11.06□□□□□ -0.64
CAPN9-202ENST00000354537 BTNL2Q9UIR0 455 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 PCDHGB2Q9Y5G2 931 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 PRSS21Q9Y6M0 314 aa11.06□□□□□ -0.64
CAPN9-202ENST00000354537 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 MTMR11A4FU01 709 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 EFCAB10A6NFE3 127 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 AGAP14A8MT82 685 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 SCAMP3O14828 347 aaKnown RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 SLC16A5O15375 505 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 CAPN5O15484 640 aaPredicted RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 IDH3BO43837 385 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 MPZL2O60487 215 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 C8GP07360 202 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 ADORA3P0DMS8 318 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 TCEA1P23193 301 aaKnown RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 C21orf33P30042 268 aaPredicted RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 PCGF2P35227 344 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 RCVRNP35243 200 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 SLC6A12P48065 614 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 RPS24P62847 133 aaKnown RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 ARHGEF7Q14155 803 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 STARD3Q14849 445 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 ARMCX4Q5H9R4 360 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 RNF219Q5W0B1 726 aaPredicted RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 FAM124AQ86V42 546 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 SYTL1Q8IYJ3 562 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 GPR152Q8TDT2 470 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 TP53INP1Q96A56 240 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 REXO4Q9GZR2 422 aaKnown RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 CHST8Q9H2A9 424 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 FBXL12Q9NXK8 326 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 FNDC3AQ9Y2H6 1198 aaKnown RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 WBP11Q9Y2W2 641 aaKnown RBP11.05□□□□□ -0.64
CAPN9-202ENST00000354537 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 PCDHGA2Q9Y5H1 932 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 NOX1Q9Y5S8 564 aa11.05□□□□□ -0.64
CAPN9-202ENST00000354537 MYADML2A6NDP7 307 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 B4GALT3O60512 393 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 UGDHO60701 494 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 DIRAS1O95057 198 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 CD72P21854 359 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 GTF2E2P29084 291 aaKnown RBP11.04□□□□□ -0.64
CAPN9-202ENST00000354537 DDOSTP39656 456 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 NR4A2P43354 598 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 HTR3AP46098 478 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 RPIAP49247 311 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 PRIM2P49643 509 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 COPZ1P61923 177 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 CCL14Q16627 93 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 PDE12Q6L8Q7 609 aaKnown RBP11.04□□□□□ -0.64
CAPN9-202ENST00000354537 FAM151BQ6UXP7 276 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 TTC9BQ8N6N2 239 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 NLGN2Q8NFZ4 835 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 MTFMTQ96DP5 389 aaKnown RBP11.04□□□□□ -0.64
CAPN9-202ENST00000354537 APIPQ96GX9 242 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 MYO19Q96H55 970 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 BOCQ9BWV1 1114 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 SLC12A9Q9BXP2 914 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 ZFYVE1Q9HBF4 777 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 QPCTLQ9NXS2 382 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 TTC3P53804 2025 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.04□□□□□ -0.64
CAPN9-202ENST00000354537 SLC38A8A6NNN8 435 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 PDZK1P1A8MUH7 402 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 TNFRSF11BO00300 401 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 TLL1O43897 1013 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 ITGB6P18564 788 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 GRK5P34947 590 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 SLC15A1P46059 708 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 OR1G1P47890 313 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 OR2B6P58173 313 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 PCDH1Q08174 1060 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 TWF1Q12792 350 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 UGT8Q16880 541 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 FRG2Q64ET8 278 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 CXorf57Q6NSI4 855 aaKnown RBP11.04□□□□□ -0.64
CAPN9-202ENST00000354537 ZNF621Q6ZSS3 439 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 CAMKMTQ7Z624 323 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 RNF130Q86XS8 419 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 KRT73Q86Y46 540 aa11.04□□□□□ -0.64
CAPN9-202ENST00000354537 SIMC1Q8NDZ2 872 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms