RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 ZFAND4Q86XD8 727 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 PLD3Q8IV08 490 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 OR4N4Q8N0Y3 316 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 TBC1D19Q8N5T2 526 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
SEC13-202ENST00000350697 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 RERGQ96A58 199 aaPredicted RBP13.34□□□□□ -0.27
SEC13-202ENST00000350697 PHF21BQ96EK2 531 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 OR2A5Q96R48 311 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 SMC6Q96SB8 1091 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 AIF1LQ9BQI0 150 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 SARGQ9BW04 601 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 EHD1Q9H4M9 534 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 MKS1Q9NXB0 559 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 EMCNQ9ULC0 261 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 KCNE1BA0A087WTH5 132 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 A8MT66 165 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 H0YGG7 62 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 ZNF749O43361 778 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 H2AFYO75367 372 aaKnown RBP13.33□□□□□ -0.28
SEC13-202ENST00000350697 SIX3O95343 332 aaPredicted RBP13.33□□□□□ -0.28
SEC13-202ENST00000350697 NTRK1P04629 796 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 CTSBP07858 339 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 HBQ1P09105 142 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 C1GALT1C1LP0DN25 315 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 LIPCP11150 499 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 EPB42P16452 691 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 CXCR2P25025 360 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 PIK3CGP48736 1102 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 ARF3P61204 181 aaPredicted RBP13.33□□□□□ -0.28
SEC13-202ENST00000350697 NFKB2Q00653 900 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 MAP7Q14244 749 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 GRM7Q14831 915 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 WASHC2DQ5SRD0 308 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 PRAMEF17Q5VTA0 474 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 PROSER1Q86XN7 944 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 DTX1Q86Y01 620 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 BANPQ8N9N5 519 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 PGM2Q96G03 612 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 APOPT1Q96IL0 206 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 SLC7A5P2Q9GIP4 190 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 IQCGQ9H095 443 aaKnown RBP13.33□□□□□ -0.28
SEC13-202ENST00000350697 CENPHQ9H3R5 247 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 ACTR5Q9H9F9 607 aaPredicted RBP13.33□□□□□ -0.28
SEC13-202ENST00000350697 SRPK3Q9UPE1 567 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 ANGPTL3Q9Y5C1 460 aa13.33□□□□□ -0.28
SEC13-202ENST00000350697 MAP1BP46821 2468 aaKnown RBP13.33□□□□□ -0.28
SEC13-202ENST00000350697 TRBC2A0A5B9 178 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 FEZF1A0PJY2 475 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 FITM1A5D6W6 292 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 LRRC14BA6NHZ5 514 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 TXNDC9O14530 226 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 PLIN3O60664 434 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 RAD1O60671 282 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 KATNA1O75449 491 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 PROCP04070 461 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 EIF2S1P05198 315 aaKnown RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 MYZAPP0CAP1 466 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 EPORP19235 508 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 ATP5F1P24539 256 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 VARSP26640 1264 aaKnown RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 EEF1DP29692 281 aaKnown RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 BCL6P41182 706 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 REEP5Q00765 189 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 MEF2AQ02078 507 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 GTF2H2Q13888 395 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 TBCCQ15814 346 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 XKR6Q5GH73 641 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 GTF2H2CQ6P1K8 395 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 C6orf15Q6UXA7 325 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 SLC22A9Q8IVM8 553 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 NLGN4XQ8N0W4 816 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 ESX1Q8N693 406 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 ZNF655Q8N720 491 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 CSNK1A1LQ8N752 337 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 TTC29Q8NA56 475 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 MFSD9Q8NBP5 474 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 GALNT6Q8NCL4 622 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 NLGN4YQ8NFZ3 816 aaPredicted RBP13.32□□□□□ -0.28
SEC13-202ENST00000350697 KCNE4Q8WWG9 221 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 CLIP3Q96DZ5 547 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 LRFN5Q96NI6 719 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 NDC1Q9BTX1 674 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 SYNPO2LQ9H987 977 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 STARD5Q9NSY2 213 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 PLLPQ9Y342 182 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
SEC13-202ENST00000350697 E2F3O00716 465 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 OR1F1O43749 312 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 LCMT2O60294 686 aaKnown RBP13.31□□□□□ -0.28
SEC13-202ENST00000350697 DLX3O60479 287 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 EIF2S3P41091 472 aaKnown RBP13.31□□□□□ -0.28
SEC13-202ENST00000350697 CASP2P42575 452 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 GCGRP47871 477 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 ATP1A2P50993 1020 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 ARSFP54793 590 aa13.31□□□□□ -0.28
SEC13-202ENST00000350697 HERVK_113P63132 956 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms