RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CBFA2T3O75081 653 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 ULK1O75385 1050 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 SKAP2O75563 359 aaPredicted RBP25.98■■□□□ 1.75
SSBP4-202ENST00000348495 C9P02748 559 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 NAA25Q14CX7 972 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 ABRAXAS2Q15018 415 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 AMZ1Q400G9 498 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 VWA5B1Q5TIE3 1220 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 FCRL6Q6DN72 434 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 EPGNQ6UW88 154 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 TMIGD1Q6UXZ0 262 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 UBE2E3Q969T4 207 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 ZDHHC12Q96GR4 267 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 CD180Q99467 661 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 ELOVL6Q9H5J4 265 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 MEAF6Q9HAF1 191 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 BTRCQ9Y297 605 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 PTGDR2Q9Y5Y4 395 aa25.98■■□□□ 1.75
SSBP4-202ENST00000348495 MN1Q10571 1320 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-202ENST00000348495 PIP5K1BO14986 540 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 PVRP15151 417 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 ACP1P24666 158 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 ZNF33BQ06732 778 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 HIST2H2ACQ16777 129 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-202ENST00000348495 HIST2H2AA3Q6FI13 130 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 ADCK2Q7Z695 626 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 C19orf60Q96EN9 201 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 PHOX2BQ99453 314 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 C1GALT1Q9NS00 363 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 FTSJ1Q9UET6 329 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 A0A1W2PQM1 296 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 TRBC2A0A5B9 178 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 TRPC5OSA6NMA1 111 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 GDF9O60383 454 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 NEK2P51955 445 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 RELAQ04206 551 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 SF3A3Q12874 501 aaKnown RBP eCLIP25.97■■□□□ 1.753e-6■■■□□ 14.7
SSBP4-202ENST00000348495 XKR7Q5GH72 579 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 C10orf62Q5T681 223 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-202ENST00000348495 ADNP2Q6IQ32 1131 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 FIGLAQ6QHK4 219 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 TRIM46Q7Z4K8 759 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 PLXDC1Q8IUK5 500 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 BCAS4Q8TDM0 211 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 C10orf82Q8WW14 230 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 STON2Q8WXE9 905 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 REPS1Q96D71 796 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 MAELQ96JY0 434 aaKnown RBP25.97■■□□□ 1.75
SSBP4-202ENST00000348495 C3orf30Q96M34 536 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 TGM7Q96PF1 710 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 MAP3K3Q99759 626 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 CCT7Q99832 543 aa25.97■■□□□ 1.75
SSBP4-202ENST00000348495 A0A0G2JND7 137 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 FEZF1A0PJY2 475 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 SERTM1A2A2V5 107 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 HAT1O14929 419 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 PDYNP01213 254 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 IDH3AP50213 366 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 CCL7P80098 99 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 IFT88Q13099 833 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 ZIC1Q15915 447 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 SLC9B1Q4ZJI4 515 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 FAM92BQ6ZTR7 304 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 USP53Q70EK8 1073 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 ANKRD53Q8N9V6 530 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 ZNF473Q8WTR7 871 aaKnown RBP25.96■■□□□ 1.75
SSBP4-202ENST00000348495 TRAPPC9Q96Q05 1148 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 EBF4Q9BQW3 602 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 RHBGQ9H310 441 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 CCL27Q9Y4X3 112 aa25.96■■□□□ 1.75
SSBP4-202ENST00000348495 TLCD2A6NGC4 264 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 SDHDO14521 159 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 KIF1CO43896 1103 aaKnown RBP25.95■■□□□ 1.74
SSBP4-202ENST00000348495 LCMT2O60294 686 aaKnown RBP25.95■■□□□ 1.74
SSBP4-202ENST00000348495 LINC00032P0C843 101 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 HOXB3P14651 431 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-202ENST00000348495 ST6GAL1P15907 406 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 CDH3P22223 829 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 SCTRP47872 440 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 SGO1Q5FBB7 561 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 SCIMPQ6UWF3 145 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 DDIASQ8IXT1 998 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 CARFQ8N187 725 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 HUS1BQ8NHY5 278 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 SELENOMQ8WWX9 145 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 HBEGFQ99075 208 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 NUDT22Q9BRQ3 303 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 KLHL25Q9H0H3 589 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 LRRN3Q9H3W5 708 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 SEMA5BQ9P283 1151 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 PILRAQ9UKJ1 303 aa25.95■■□□□ 1.74
SSBP4-202ENST00000348495 RPLP0P05388 317 aaKnown RBP25.94■■□□□ 1.74
SSBP4-202ENST00000348495 GP1BAP07359 652 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 EZRP15311 586 aaKnown RBP25.94■■□□□ 1.74
SSBP4-202ENST00000348495 GRK3P35626 688 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 PPM1FP49593 454 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-202ENST00000348495 NHLH1Q02575 133 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 FBXO42Q6P3S6 717 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 ASCL5Q7RTU5 278 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 VN1R5Q7Z5H4 357 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms