RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PDCD2Q16342 344 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 SGO1Q5FBB7 561 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 VWA5B1Q5TIE3 1220 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 VN1R5Q7Z5H4 357 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 WDR20Q8TBZ3 569 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 TWIST2Q8WVJ9 160 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 PPP1R36Q96LQ0 422 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 FCRL4Q96PJ5 515 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 HBEGFQ99075 208 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 EFCAB11Q9BUY7 163 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 SLC29A3Q9BZD2 475 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 SYNDIG1Q9H7V2 258 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 FAM60AQ9NP50 221 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 NPHS2Q9NP85 383 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 SNX7Q9UNH6 387 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 USH1CQ9Y6N9 552 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 MN1Q10571 1320 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 ADAMTS20P59510 1910 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 H0YIV9 168 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 HCRTR1O43613 425 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 FOXD2O60548 495 aaPredicted RBP18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 CTSVO60911 334 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 BCL6P41182 706 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 BTKQ06187 659 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 ABRAXAS2Q15018 415 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 TUBB8Q3ZCM7 444 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 SNAP47Q5SQN1 464 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 FBXO42Q6P3S6 717 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 WDR74Q6RFH5 385 aaPredicted RBP18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 LAS2Q8IYD9 372 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 ANKRD53Q8N9V6 530 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 OR7G3Q8NG95 312 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 ZDHHC12Q96GR4 267 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 C3orf30Q96M34 536 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 AIF1LQ9BQI0 150 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 KCNK13Q9HB14 408 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 C1GALT1Q9NS00 363 aa18.22■□□□□ 0.51
CHMP4A-201ENST00000347519 DCHS1Q96JQ0 3298 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 TLCD2A6NGC4 264 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 NTN3O00634 580 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 PIP5K1BO14986 540 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 FKBP9O95302 570 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 PDYNP01213 254 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 STATHP02808 62 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 PCNAP12004 261 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 LAPTM5Q13571 262 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 RBBP5Q15291 538 aaKnown RBP18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 CACHD1Q5VU97 1274 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 MED27Q6P2C8 311 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 TMEM71Q6P5X7 295 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 PLXDC1Q8IUK5 500 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 C19orf47Q8N9M1 422 aaKnown RBP18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 USP7Q93009 1102 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 ZUFSPQ96AP4 578 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 CD180Q99467 661 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 ELAC2Q9BQ52 826 aaKnown RBP18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 NUF2Q9BZD4 464 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 ZMYND15Q9H091 742 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 DCTN4Q9UJW0 460 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 PILRAQ9UKJ1 303 aa18.21■□□□□ 0.51
CHMP4A-201ENST00000347519 ZNF292O60281 2723 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 TRBC2A0A5B9 178 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 SRRM3A6NNA2 597 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 A8MU76 341 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 HDAC3O15379 428 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 ZW10O43264 779 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 OR1F1O43749 312 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 TGDSO95455 350 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 CPNE6O95741 557 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 TBX6O95947 436 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 LINC00032P0C843 101 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 ALOX15P16050 662 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 HRH2P25021 359 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 SCTRP47872 440 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 CYP4F3Q08477 520 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 DDX39BQ13838 428 aaKnown RBP18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 SLC9B1Q4ZJI4 515 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 PAGE2BQ5JRK9 111 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 FRG2Q64ET8 278 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 TMIGD1Q6UXZ0 262 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 KIAA2013Q8IYS2 634 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 KRT78Q8N1N4 520 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 DEFB124Q8NES8 71 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 OR2T11Q8NH01 316 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 HUS1BQ8NHY5 278 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 MAGEB10Q96LZ2 347 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 FRG2BQ96QU4 278 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 CCT8L2Q96SF2 557 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 CDC6Q99741 560 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 NT5DC2Q9H857 520 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 TOR4AQ9NXH8 423 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 SEMA5BQ9P283 1151 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 ANKMY1Q9P2S6 941 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 GIMAP2Q9UG22 337 aa18.2■□□□□ 0.5
CHMP4A-201ENST00000347519 PCNX2A6NKB5 2137 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 SDHDO14521 159 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 RASSF9O75901 435 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 GP1BAP07359 652 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 CTSBP07858 339 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms