RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ARHGAP12Q8IWW6 846 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 MOAP1Q96BY2 351 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 BTF3L4Q96K17 158 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 HAPLN3Q96S86 360 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 EBPLQ9BY08 206 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 TREHO43280 583 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 HSPA7P48741 367 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 ACTBP60709 375 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 ACTG1P63261 375 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
HDAC4-201ENST00000345617 OR10G6Q8NH81 332 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 ENDOUP21128 410 aaKnown RBP18.87■□□□□ 0.61
HDAC4-201ENST00000345617 ATP6AP1Q15904 470 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 FTMTQ8N4E7 242 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 CELF2O95319 508 aaKnown RBP18.87■□□□□ 0.61
HDAC4-201ENST00000345617 MRM3Q9HC36 420 aaKnown RBP18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PAK4O96013 591 aaPredicted RBP18.87■□□□□ 0.61
HDAC4-201ENST00000345617 HTR1AP08908 422 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 CAPN3P20807 821 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 NUMBP49757 651 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PLEKHG7Q6ZR37 379 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 SLC16A9Q7RTY1 509 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PARGQ86W56 976 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 JAGN1Q8N5M9 183 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 NINJ1Q92982 152 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 TMEM68Q96MH6 324 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 IFT52Q9Y366 437 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 ZFC3H1O60293 1989 aaKnown RBP18.87■□□□□ 0.61
HDAC4-201ENST00000345617 GTF2F2P13984 249 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 L1CAMP32004 1257 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 GRM5P41594 1212 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 JCADQ9P266 1359 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 IL10RBQ08334 325 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 PGAP1Q75T13 922 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ABCG8Q9H221 673 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 TEX13DA0A0J9YY54 714 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 FFAR2O15552 330 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 PROZP22891 400 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 OR12D2P58182 307 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 SMYD5Q6GMV2 418 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 C12orf29Q8N999 325 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 IDI2Q9BXS1 227 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 EIF5A2Q9GZV4 153 aaKnown RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 VPS29Q9UBQ0 182 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 GXYLT2A0PJZ3 443 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 MAN2A2P49641 1150 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ATP4BP51164 291 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 DSTNP60981 165 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 KCNC4Q03721 635 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 LAMP5Q9UJQ1 280 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 TGM6O95932 706 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 CRYBB1P53674 252 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ST3GAL3Q11203 375 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 C3orf33Q6P1S2 294 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 DPY19L3Q6ZPD9 716 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 IQCHQ86VS3 1027 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 MARCH9Q86YJ5 346 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 HCAR2Q8TDS4 363 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 SLC5A7Q9GZV3 580 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF334Q9HCZ1 680 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 CNOT11Q9UKZ1 510 aaKnown RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 C1orf167Q5SNV9 1468 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 HTR2BP41595 481 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 EARS2Q5JPH6 523 aaKnown RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 GPR151Q8TDV0 419 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF558Q96NG5 402 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 EFCAB11Q9BUY7 163 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 GNG8Q9UK08 70 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 CLIC1O00299 241 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 CDRT1O95170 752 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF182P17025 639 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ANKRD22Q5VYY1 191 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ADGRA1Q86SQ6 560 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF584Q8IVC4 421 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 NEIL3Q8TAT5 605 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 FAM163AQ96GL9 167 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-201ENST00000345617 EPHB6O15197 1021 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 ARL9Q6T311 187 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 SAMD12Q8N8I0 201 aa18.86■□□□□ 0.61
HDAC4-201ENST00000345617 HTR3EA5X5Y0 456 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 SCDO00767 359 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 RAD9AQ99638 391 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 HSD17B14Q9BPX1 270 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 TIMM22Q9Y584 194 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 TECPR2O15040 1411 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 OR1F1O43749 312 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 MRPS14O60783 128 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 FZD4Q9ULV1 537 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 C2orf74A8MZ97 194 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 K7EPI3 171 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 SLC3A1Q07837 685 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 GTF2IRD2BQ6EKJ0 949 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 GTF2IRD2Q86UP8 949 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 DHRS1Q96LJ7 313 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 EIF2B4Q9UI10 523 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 GANABQ14697 944 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 FKBP10Q96AY3 582 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms