RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 CDKL1Q00532 357 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 RFLNAQ6ZTI6 216 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 ZFAND4Q86XD8 727 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 SCML4Q8N228 414 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 LMNTD1Q8N9Z9 388 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 WDR48Q8TAF3 677 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 C12orf43Q96C57 262 aaKnown RBP12.68□□□□□ -0.38
TCF3-202ENST00000344749 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
TCF3-202ENST00000344749 UBXN10Q96LJ8 280 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 Q96MT0 163 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 MARCH5Q9NX47 278 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 OAS3Q9Y6K5 1087 aaKnown RBP12.68□□□□□ -0.38
TCF3-202ENST00000344749 PRSS21Q9Y6M0 314 aa12.68□□□□□ -0.38
TCF3-202ENST00000344749 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 RTCAO00442 366 aaKnown RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 ERI3O43414 337 aaKnown RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 DYRK3O43781 588 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 B4GALT3O60512 393 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 CCNDBP1O95273 360 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 C8orf89P0DMQ9 161 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 NR2F6P10588 404 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 PTNP21246 168 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TALDO1P37837 337 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TRIQKQ629K1 86 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 CLECL1Q8IZS7 167 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 ZNF641Q96N77 438 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 SLC38A2Q96QD8 506 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TFECO14948 347 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 AIREO43918 545 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 NME6O75414 186 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 BCHEP06276 602 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 NT5EP21589 574 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 JAK1P23458 1154 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 RFC2P35250 354 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 LRRC32Q14392 662 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 ZBED5Q49AG3 693 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 SNAP47Q5SQN1 464 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.388e-7■■■□□ 16.5
TCF3-202ENST00000344749 NPAS3Q8IXF0 933 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 SIX5Q8N196 739 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 RNF175Q8N4F7 328 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 MARVELD2Q8N4S9 558 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 WFIKKN2Q8TEU8 576 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TP53INP1Q96A56 240 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TCEAL4Q96EI5 215 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 CMTM7Q96FZ5 175 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 KLF16Q9BXK1 252 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 ZNF334Q9HCZ1 680 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 ADAP2Q9NPF8 381 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 TVP23BQ9NYZ1 205 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 BTBD3Q9Y2F9 522 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 PCDHGB3Q9Y5G1 929 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 CCNB2O95067 398 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 CDK6Q00534 326 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 GALNT1Q10472 559 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 ZNF805Q5CZA5 627 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 FAM219BQ5XKK7 198 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 FAM20CQ8IXL6 584 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 HS3ST5Q8IZT8 346 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 AHCYL2Q96HN2 611 aaKnown RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 THUMPD1Q9NXG2 353 aaKnown RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 VAPAQ9P0L0 249 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 USP22Q9UPT9 525 aa12.67□□□□□ -0.38
TCF3-202ENST00000344749 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
TCF3-202ENST00000344749 KIAA1217Q5T5P2 1943 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 SLC16A8O95907 504 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 FGF4P08620 206 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
TCF3-202ENST00000344749 FSHRP23945 695 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 TARDBPQ13148 414 aaKnown RBP eCLIP12.66□□□□□ -0.385e-10■■■■■ 28.5
TCF3-202ENST00000344749 CEACAM20Q6UY09 585 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 LRRTM4Q86VH4 590 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 APIPQ96GX9 242 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 PRICKLE1Q96MT3 831 aaPredicted RBP12.66□□□□□ -0.38
TCF3-202ENST00000344749 SLC46A2Q9BY10 475 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 MARCH7Q9H992 704 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 PTGFRNQ9P2B2 879 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 ACSL6Q9UKU0 697 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 N6AMT1Q9Y5N5 214 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 NUMBLQ9Y6R0 609 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 UBFD1O14562 309 aaKnown RBP12.66□□□□□ -0.38
TCF3-202ENST00000344749 LATO43561 262 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 TMCC2O75069 709 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 EEDO75530 441 aaKnown RBP12.66□□□□□ -0.38
TCF3-202ENST00000344749 DNAJA1P31689 397 aaKnown RBP12.66□□□□□ -0.38
TCF3-202ENST00000344749 CSNK2BP67870 215 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 MGAT3Q09327 533 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 LRP8Q14114 963 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 SH2D5Q6ZV89 423 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 DTWD1Q8N5C7 304 aa12.66□□□□□ -0.38
TCF3-202ENST00000344749 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms