RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 OR2T5Q6IEZ7 315 aa11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 C1orf52Q8N6N3 182 aaKnown RBP11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 OR2T29Q8NH02 315 aa11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 PYURFQ96I23 114 aa11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 PRICKLE1Q96MT3 831 aaPredicted RBP11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 DPYSL5Q9BPU6 564 aa11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 SLC30A2Q9BRI3 323 aa11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 SSU72Q9NP77 194 aaKnown RBP11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 SH2B3Q9UQQ2 575 aa11.85□□□□□ -0.51
SEMA6A-202ENST00000343348 ZNF705EA8MWA4 302 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 HOXC6P09630 235 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ZNF81P51508 661 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 CCR8P51685 355 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 LILRA4P59901 499 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 CAP1Q01518 475 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 NFATC2Q13469 925 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 HAGHLQ6PII5 290 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 CEACAM20Q6UY09 585 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 MAGEH1Q9H213 219 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 XKR8Q9H6D3 395 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 POFUT2Q9Y2G5 429 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 SLC38A8A6NNN8 435 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ANXA8P13928 327 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 MECP2P51608 486 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 RIN1Q13671 783 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TBRG1Q3YBR2 411 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 DGAT2Q96PD7 388 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TBL1XR1Q9BZK7 514 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 GIMAP2Q9UG22 337 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 NOCTQ9UK39 431 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TEX13DA0A0J9YY54 714 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ACP5P13686 325 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 RPL10P27635 214 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 MAP2K4P45985 399 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 SMSP52788 366 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 YBEYP58557 167 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TBC1D25Q3MII6 688 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 FUT10Q6P4F1 479 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 HMGN2P46Q86SG4 172 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 AMZ2Q86W34 360 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 NAT8LQ8N9F0 302 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ZNF641Q96N77 438 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 SOX17Q9H6I2 414 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 C14orf166Q9Y224 244 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 NUAK1O60285 661 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TOXO94900 526 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 CKMT1AP12532 417 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 MMP14P50281 582 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 GAD2Q05329 585 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 GEMIN6Q8WXD5 167 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 SPATA7Q9P0W8 599 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 UTS2RQ9UKP6 389 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 CLCA3PQ9Y6N3 262 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ZNF182P17025 639 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ADH7P40394 386 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 RPP38P78345 283 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TXNRD3NBQ6F5E7 133 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 TUBA3EQ6PEY2 450 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ARSKQ6UWY0 536 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 ZNF227Q86WZ6 799 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 NDC1Q9BTX1 674 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 MS4A12Q9NXJ0 267 aa11.84□□□□□ -0.51
SEMA6A-202ENST00000343348 A0A0J9YVX5 310 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 A0A1B0GV50 99 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 FAM170BA6NMN3 283 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 A8MT66 165 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 IL1R2P27930 398 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 DAOAP59103 153 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 ILF3Q12906 894 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 ALG10Q5BKT4 473 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 SYPL2Q5VXT5 272 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 COMTD1Q86VU5 262 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 SMG8Q8ND04 991 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 OR52E4Q8NGH9 312 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 CGREF1Q99674 301 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 TMEM109Q9BVC6 243 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 NUSAP1Q9BXS6 441 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 C14orf119Q9NWQ9 140 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 B4DGG1 531 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 RPS24P62847 133 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 CCDC58Q4VC31 144 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 ENPP7Q6UWV6 458 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 IRGQQ8WZA9 623 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 TFB2MQ9H5Q4 396 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 ENAMQ9NRM1 1142 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 CNTN3Q9P232 1028 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 HAS3O00219 553 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 ZNF565Q8N9K5 539 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 NCSTNQ92542 709 aa11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 MRPL15Q9P015 296 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-202ENST00000343348 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms