RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ABATP80404 500 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 PDCD4Q53EL6 469 aaKnown RBP16.68■□□□□ 0.26
CLDN4-201ENST00000340958 PARP9Q8IXQ6 854 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 NAGSQ8N159 534 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 RBM15BQ8NDT2 890 aaKnown RBP16.68■□□□□ 0.26
CLDN4-201ENST00000340958 ZFPM2Q8WW38 1151 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 RTKNQ9BST9 563 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 SLC25A23Q9BV35 468 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 EFCAB1Q9HAE3 211 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 TAS2R1Q9NYW7 299 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 GON4LQ3T8J9 2241 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 LRP4O75096 1905 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 A0A1B0GTW7 788 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 A0A1B0GVT2 93 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 SERTM1A2A2V5 107 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 GSAPA4D1B5 854 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 ANKDD1BA6NHY2 528 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 AQP9O43315 295 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 SDC3O75056 442 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 ANXA6P08133 673 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 NQO1P15559 274 aaKnown RBP16.68■□□□□ 0.26
CLDN4-201ENST00000340958 PPM1FP49593 454 aaPredicted RBP16.68■□□□□ 0.26
CLDN4-201ENST00000340958 KCNK10P57789 538 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 RPS13P62277 151 aaKnown RBP16.68■□□□□ 0.26
CLDN4-201ENST00000340958 HHEXQ03014 270 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 E2F2Q14209 437 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 DNAL1Q4LDG9 190 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 CYP20A1Q6UW02 462 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 LAS2Q8IYD9 372 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 LIX1Q8N485 282 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 TBC1D19Q8N5T2 526 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 ABHD11Q8NFV4 315 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 OR2A1Q8NGT9 310 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 RCN3Q96D15 328 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 APOLD1Q96LR9 279 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 ZBTB18Q99592 522 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 TBC1D10AQ9BXI6 508 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 SPHK1Q9NYA1 384 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 TMED5Q9Y3A6 229 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 FAM186AA6NE01 2351 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ZNF292O60281 2723 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 FEZF1A0PJY2 475 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 OR6C74A6NCV1 312 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 YY2O15391 372 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 CD1EP15812 388 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 UFM1P61960 85 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 SLC25A3Q00325 362 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ACSM2AQ08AH3 577 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 GRIK2Q13002 908 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ACSM2BQ68CK6 577 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 PMS2CLQ68D20 193 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ADNP2Q6IQ32 1131 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 FAM20CQ8IXL6 584 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ARHGAP24Q8N264 748 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 AVL9Q8NBF6 648 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ZNF740Q8NDX6 193 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 APIPQ96GX9 242 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 BRINP2Q9C0B6 783 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 SPNS1Q9H2V7 528 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 ZIM2Q9NZV7 527 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 SUSD2Q9UGT4 822 aa16.67■□□□□ 0.26
CLDN4-201ENST00000340958 VGLL3A8MV65 326 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 C9JVG2 144 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 FOXE1O00358 373 aaPredicted RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 ANGPT2O15123 496 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 OR1F1O43749 312 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 GFRA3O60609 400 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 TGFB1P01137 390 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 KRT16P08779 473 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 POLR2CP19387 275 aaPredicted RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 UBE2IP63279 158 aaKnown RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 CYP4F2P78329 520 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 KIR2DS3Q14952 304 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 DEFB133Q30KQ1 61 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 ARMC6Q6NXE6 501 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 FAM129CQ86XR2 697 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 RBM12BQ8IXT5 1001 aaKnown RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 KYQ8NBH2 561 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 ZNF548Q8NEK5 533 aaPredicted RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 GPR156Q8NFN8 814 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 OR2L3Q8NG85 312 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 FBXO27Q8NI29 283 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 NPAS2Q99743 824 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 C1orf21Q9H246 121 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 ADGRE2Q9UHX3 823 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 RALGAPA1Q6GYQ0 2036 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 BTN3A3O00478 584 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 PRPS2P11908 318 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 AMD1P17707 334 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 PRPH2P23942 346 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 HRH2P25021 359 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 PGM1P36871 562 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 POLR2JP52435 117 aaKnown RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 C16orf89Q6UX73 402 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 FAM9CQ8IZT9 166 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 PIGKQ92643 395 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 DPH7Q9BTV6 452 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 EBPLQ9BY08 206 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 DPY30Q9C005 99 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms