RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 LCTLQ6UWM7 567 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 COX15Q7KZN9 410 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 PPP1R32Q7Z5V6 425 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 C17orf64Q86WR6 236 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 COL26A1Q96A83 441 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 FBXL8Q96CD0 374 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 C10orf90Q96M02 699 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 OLFM1Q99784 485 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 EPN3Q9H201 632 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 SAYSD1Q9NPB0 183 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 C14orf105Q9NVL8 296 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 GPR83Q9NYM4 423 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 C5AR2Q9P296 337 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC17A6Q9P2U8 582 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 RUVBL1Q9Y265 456 aaKnown RBP12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 PSAT1Q9Y617 370 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 HEATR5BQ9P2D3 2071 aa12.71□□□□□ -0.38
SIRPB3P-201ENST00000340424 IGLV3-12A0A075B6K2 115 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 FAM95CA0A1B0GW59 222 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 H7BY64 318 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 HAT1O14929 419 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 DPM1O60762 260 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 IPO13O94829 963 aaKnown RBP12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 ANXA5P08758 320 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 OR1D4P47884 311 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLC12A2P55011 1212 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 CDKL1Q00532 357 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 POU4F1Q01851 419 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 KCNC4Q03721 635 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 AIMP2Q13155 320 aaKnown RBP12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 NAE1Q13564 534 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 PHKG1Q16816 387 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 ADAMTSL2Q86TH1 951 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 TBC1D19Q8N5T2 526 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 FDCSPQ8NFU4 85 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 OR56A3Q8NH54 315 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 MIEF2Q96C03 454 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 TSPAN17Q96FV3 270 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 PRAP1Q96NZ9 151 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 SMAD5Q99717 465 aaKnown RBP12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 CPNE1Q99829 537 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 MCMBPQ9BTE3 642 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 DRC3Q9H069 523 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 ATP13A2Q9NQ11 1180 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 ABCF3Q9NUQ8 709 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 CDC23Q9UJX2 597 aa12.7□□□□□ -0.38
SIRPB3P-201ENST00000340424 UBR5O95071 2799 aaPredicted RBP12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLU7O95391 586 aaKnown RBP12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 CYC1P08574 325 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 ZGLP1P0C6A0 271 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 NPPBP16860 134 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 AVPR1BP47901 424 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 HNMTP50135 292 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 MYBPC3Q14896 1274 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 RBBP7Q16576 425 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 WHAMMP3Q1A5X7 153 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 HKDC1Q2TB90 917 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 SBSNQ6UWP8 590 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 GALNT16Q8N428 558 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 ARHGEF39Q8N4T4 335 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 CAMKVQ8NCB2 501 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 ABHD11Q8NFV4 315 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 STT3BQ8TCJ2 826 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 TM9SF4Q92544 642 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 CRB3Q9BUF7 120 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 SARGQ9BW04 601 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 TGIF2Q9GZN2 237 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 ATG10Q9H0Y0 220 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 CLMPQ9H6B4 373 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 GPAMQ9HCL2 828 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 MKKSQ9NPJ1 570 aaPredicted RBP12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 CUEDC1Q9NWM3 386 aaPredicted RBP12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 MAU2Q9Y6X3 613 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 NUP210LQ5VU65 1888 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
SIRPB3P-201ENST00000340424 TCRBV9S1A1TA0A576 114 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 H0YIG0 161 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 K7EM74 188 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 MED26O95402 600 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 PDGFAP04085 211 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 NR1D1P20393 614 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 SAT1P21673 171 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 VARSP26640 1264 aaKnown RBP12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 SSTR1P30872 391 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 STX2P32856 288 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 GP5P40197 560 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLC26A3P40879 764 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 CCR8P51685 355 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 PLTPP55058 493 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 TAS2R39P59534 338 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 CSNK1G2P78368 415 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 NAB1Q13506 487 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 PPP1R3AQ16821 1122 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 IRAK1BP1Q5VVH5 260 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 NIPAL1Q6NVV3 410 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms