RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 SCN3AQ9NY46 2000 aa13.6□□□□□ -0.23
CTSL-201ENST00000340342 FEZF1A0PJY2 475 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 LRRC14BA6NHZ5 514 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 H0YGG7 62 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 ZSCAN9O15535 394 aaPredicted RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 CCNT2O60583 730 aaKnown RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 CPNE3O75131 537 aaKnown RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 STK16O75716 305 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 EIF2S1P05198 315 aaKnown RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 CCNYL3P0C7X3 344 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 GFAPP14136 432 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 ARF3P61204 181 aaPredicted RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 RHDQ02161 417 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 GPS2Q13227 327 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 RASA2Q15283 850 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 C16orf46Q6P387 395 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 SH2D5Q6ZV89 423 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 TMPRSS11BQ86T26 416 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 IQCKQ8N0W5 287 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 ZNF740Q8NDX6 193 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 SLC5A11Q8WWX8 675 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 KIAA1143Q96AT1 154 aaPredicted RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 CNOT10Q9H9A5 744 aaKnown RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 ACTR5Q9H9F9 607 aaPredicted RBP13.59□□□□□ -0.23
CTSL-201ENST00000340342 TMEM184CQ9NVA4 438 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 TMEM216Q9P0N5 145 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 DYRK1BQ9Y463 629 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 PCDHB3Q9Y5E6 796 aa13.59□□□□□ -0.23
CTSL-201ENST00000340342 SASH3O75995 380 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
CTSL-201ENST00000340342 RBP1P09455 135 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 SBK3P0C264 359 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 HRH2P25021 359 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 VARSP26640 1264 aaKnown RBP13.58□□□□□ -0.24
CTSL-201ENST00000340342 BCL6P41182 706 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 CCR8P51685 355 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 CDC16Q13042 620 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 TMEM151AQ8N4L1 468 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 DTWD1Q8N5C7 304 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 SNX31Q8N9S9 440 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 LSM14AQ8ND56 463 aaKnown RBP13.58□□□□□ -0.24
CTSL-201ENST00000340342 ABHD11Q8NFV4 315 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 ACMSDQ8TDX5 336 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 UBTD2Q8WUN7 234 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 ZNF285Q96NJ3 590 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 OR2A5Q96R48 311 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 UBL7Q96S82 380 aaPredicted RBP13.58□□□□□ -0.24
CTSL-201ENST00000340342 MRPL57Q9BQC6 102 aaKnown RBP13.58□□□□□ -0.24
CTSL-201ENST00000340342 CD244Q9BZW8 370 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 SLC7A5P2Q9GIP4 190 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 DNAJC11Q9NVH1 559 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 DHCR7Q9UBM7 475 aaKnown RBP13.58□□□□□ -0.24
CTSL-201ENST00000340342 PADI1Q9ULC6 663 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
CTSL-201ENST00000340342 LOC101059948A0A1B0GTJ6 334 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 CCDC189A1A4V9 331 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 P2RX6O15547 441 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 KLK8O60259 260 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 LCMT2O60294 686 aaKnown RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 PRAMEF4O60810 478 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 SIX3O95343 332 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 MED26O95402 600 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 LIFP15018 202 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 STAT5AP42229 794 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 ALDH18A1P54886 795 aaKnown RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 ZNF844Q08AG5 666 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 SETDB1Q15047 1291 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 PDK4Q16654 411 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 C1orf189Q5VU69 101 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 PRAMEF9Q5VWM5 478 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 LCN10Q6JVE6 187 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 FAM199XQ6PEV8 388 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 NXPE4Q6UWF7 544 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 C4orf33Q8N1A6 199 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 RIBC1Q8N443 379 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 OR4K1Q8NGD4 311 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 PHF21BQ96EK2 531 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 WBP1Q96G27 269 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 ZIM3Q96PE6 472 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 ROPN1BQ9BZX4 212 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 MRPL46Q9H2W6 279 aaKnown RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 C12orf65Q9H3J6 166 aaKnown RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 GPN2Q9H9Y4 310 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 ROPN1Q9HAT0 212 aaPredicted RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 LGALS13Q9UHV8 139 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 RALYQ9UKM9 306 aaKnown RBP13.57□□□□□ -0.24
CTSL-201ENST00000340342 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
CTSL-201ENST00000340342 ERVH48-1M5A8F1 160 aa13.56□□□□□ -0.24
CTSL-201ENST00000340342 SRPX2O60687 465 aaPredicted RBP13.56□□□□□ -0.24
CTSL-201ENST00000340342 KRT4P19013 534 aa13.56□□□□□ -0.24
CTSL-201ENST00000340342 GNAZP19086 355 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms