RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 GYS2P54840 703 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 INSM1Q01101 510 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 CDCP2Q5VXM1 449 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 RNF44Q7L0R7 432 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 MYLK4Q86YV6 388 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 LAS2Q8IYD9 372 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 TBC1D19Q8N5T2 526 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 CCDC74BQ96LY2 380 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 TMEM74Q96NL1 305 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 SHCBP1LQ9BZQ2 653 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 KLHL25Q9H0H3 589 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 SPNS1Q9H2V7 528 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 TNFRSF12AQ9NP84 129 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 PILRAQ9UKJ1 303 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 APOBEC2Q9Y235 224 aaKnown RBP17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 TSC22D4Q9Y3Q8 395 aa17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 COL27A1Q8IZC6 1860 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-201ENST00000339987 TCP11X1B4DZS4 312 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 HAT1O14929 419 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 AZIN1O14977 448 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 MAP3K7O43318 606 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 CAPN1P07384 714 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 FTH1P19P0C7X4 201 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 UROSP10746 265 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 RPS15AP62244 130 aaKnown RBP17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 HSD11B2P80365 405 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 MEF2AQ02078 507 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 CPSF6Q16630 551 aaKnown RBP eCLIP17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 CCDC157Q569K6 752 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 SNAP47Q5SQN1 464 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 SH2D4BQ5SQS7 431 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 C10orf62Q5T681 223 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 TTC19Q6DKK2 380 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 MED27Q6P2C8 311 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 TMIGD1Q6UXZ0 262 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 SLCO6A1Q86UG4 719 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 CLYBLQ8N0X4 340 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 CDYL2Q8N8U2 506 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF740Q8NDX6 193 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 REPS1Q96D71 796 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 THAP11Q96EK4 314 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 PDE7BQ9NP56 450 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 SLCO1B3Q9NPD5 702 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 ZDHHC2Q9UIJ5 367 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF490Q9ULM2 529 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 TRAF6Q9Y4K3 522 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 PCDHGA11Q9Y5H2 935 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 WDR87Q6ZQQ6 2873 aa17.14■□□□□ 0.33
SDCBP2-201ENST00000339987 SPAARA0A1B0GVQ0 90 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 TMX2-CTNND1H3BSU7 103 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 NRP2O60462 931 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 CTSVO60911 334 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 CRCPO75575 148 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 NELFEP18615 380 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 GSTM2P28161 218 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 HMOX2P30519 316 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SERPINB1P30740 379 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 CCKBRP32239 447 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SCTRP47872 440 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 PDX1P52945 283 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ZRSR2Q15696 482 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 TUBB8Q3ZCM7 444 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ZC3H12BQ5HYM0 836 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 KANK2Q63ZY3 851 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 FBXO42Q6P3S6 717 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 CRLF3Q8IUI8 442 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 D2HGDHQ8N465 521 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 DNAJC22Q8N4W6 341 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF781Q8N8C0 355 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 MFSD9Q8NBP5 474 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 TTLQ8NG68 377 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 OR7G3Q8NG95 312 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 METTL6Q8TCB7 284 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SEC16BQ96JE7 1060 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 KCNA7Q96RP8 456 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ZFYVE21Q9BQ24 234 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 RTKNQ9BST9 563 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 RHBGQ9H310 441 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 FAM60AQ9NP50 221 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SOHLH2Q9NX45 425 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SNX6Q9UNH7 406 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 PTPRZ1P23471 2315 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 A8MU76 341 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 PRAMEF10O60809 474 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 EDF1O60869 148 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 KRT6AP02538 564 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 KRT6BP04259 564 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 MSL3P1P0C860 447 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 AHRP35869 848 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 BCL6P41182 706 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 MLLT3P42568 568 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 KRT6CP48668 564 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ARL4DP49703 201 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SEPHS1P49903 392 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 INHBCP55103 352 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 FOXA1P55317 472 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 SIM1P81133 766 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF33BQ06732 778 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms