RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TCF7L2Q9NQB0 619 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 SEMA4GQ9NTN9 838 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 ZNF490Q9ULM2 529 aaPredicted RBP13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 PPT2Q9UMR5 302 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 U3KQA8 63 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 TLCD2A6NGC4 264 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 SLC28A1O00337 649 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 FOXE1O00358 373 aaPredicted RBP13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 SDHDO14521 159 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 RGS14O43566 566 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 GRIA3P42263 894 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 SPEM2Q0P670 501 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 SQSTM1Q13501 440 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 ABRAXAS2Q15018 415 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 SF3A2Q15428 464 aaKnown RBP13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 CLPPQ16740 277 aaPredicted RBP13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 METTL21CQ5VZV1 264 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 WDR74Q6RFH5 385 aaPredicted RBP13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 PLXDC1Q8IUK5 500 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 CEP70Q8NHQ1 597 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 WDR20Q8TBZ3 569 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 SELENOMQ8WWX9 145 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 RILPQ96NA2 401 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 TUBB1Q9H4B7 451 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 C1GALT1Q9NS00 363 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 MRGBPQ9NV56 204 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 TRIM33Q9UPN9 1127 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 BTRCQ9Y297 605 aa13.96□□□□□ -0.17
NIPAL3-202ENST00000339255 RIF1Q5UIP0 2472 aaKnown RBP13.96□□□□□ -0.18
NIPAL3-202ENST00000339255 MN1Q10571 1320 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 MYO15AQ9UKN7 3530 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 OR2A25A4D2G3 310 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 LINC00032P0C843 101 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 EPHA3P29320 983 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 PPM1FP49593 454 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 RPS15AP62244 130 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 DAB2P98082 770 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 TCHHL1Q5QJ38 904 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 IRGCQ6NXR0 463 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 GUSBP11Q6P575 273 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 METTL2AQ96IZ6 378 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 DPYSL5Q9BPU6 564 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 RHBGQ9H310 441 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 SEMA6CQ9H3T2 930 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 NMRK1Q9NWW6 199 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 CPED1A4D0V7 1026 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 ANKDD1BA6NHY2 528 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 NPIPB8E9PQR5 432 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 CDX4O14627 284 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 DCTN3O75935 186 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 PDYNP01213 254 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 PCNAP12004 261 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 MAGP20916 626 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 AHRP35869 848 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 HTR6P50406 440 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 OR1D5P58170 312 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 IMPG1Q17R60 797 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 SLC9B1Q4ZJI4 515 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 ATP6AP1LQ52LC2 224 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 PAQR7Q86WK9 346 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 HUS1BQ8NHY5 278 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 BAHD1Q8TBE0 780 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 THAP11Q96EK4 314 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 EBF4Q9BQW3 602 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 CHRNA10Q9GZZ6 450 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 ZMYND15Q9H091 742 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 ABCG4Q9H172 646 aa13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 WDR55Q9H6Y2 383 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 FARSBQ9NSD9 589 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-202ENST00000339255 CAPN5O15484 640 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 MAP3K7O43318 606 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 OR1F1O43749 312 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 RSL1D1O76021 490 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 CKMT2P17540 419 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 CDH3P22223 829 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 PRPH2P23942 346 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 SCTRP47872 440 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 MEF2AQ02078 507 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 DDX39BQ13838 428 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 RBBP5Q15291 538 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 SMU1Q2TAY7 513 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 SGO1Q5FBB7 561 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 OGFOD2Q6N063 350 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 FIGLAQ6QHK4 219 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 PRR23CQ6ZRP0 262 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 TRIM73Q86UV7 250 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 ZNF740Q8NDX6 193 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 NCSTNQ92542 709 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 PPP1R36Q96LQ0 422 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 PPP3R2Q96LZ3 170 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 MTERF1Q99551 399 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 DMRT3Q9NQL9 472 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 FAM86C1Q9NVL1 165 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 FTSJ1Q9UET6 329 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms