RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SLC26A1Q9H2B4 701 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 GPAMQ9HCL2 828 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 NDOR1Q9UHB4 597 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 GPN3Q9UHW5 284 aaPredicted RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 TLK1Q9UKI8 766 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 PTRH2Q9Y3E5 179 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 MED13Q9UHV7 2174 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 RELNP78509 3460 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 CDH1P12830 882 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 CCND1P24385 295 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 HRH2P25021 359 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 STX2P32856 288 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 NKG7Q16617 165 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 GRTP1Q5TC63 336 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 CAPN13Q6MZZ7 669 aaPredicted RBP14.54□□□□□ -0.08
PRKN-201ENST00000338468 ADCK2Q7Z695 626 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 C17orf64Q86WR6 236 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 PTRH1Q86Y79 214 aaKnown RBP14.54□□□□□ -0.08
PRKN-201ENST00000338468 RELL1Q8IUW5 271 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 ABHD11Q8NFV4 315 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 SPSB2Q99619 263 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 TRIM54Q9BYV2 358 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 DERL2Q9GZP9 239 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 NINJ2Q9NZG7 142 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 CTSFQ9UBX1 484 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 PADI2Q9Y2J8 665 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 MRPS2Q9Y399 296 aaKnown RBP14.54□□□□□ -0.08
PRKN-201ENST00000338468 OARD1Q9Y530 152 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 MAU2Q9Y6X3 613 aa14.54□□□□□ -0.08
PRKN-201ENST00000338468 KCNE1BA0A087WTH5 132 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 FEZF1A0PJY2 475 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 HMX2A2RU54 273 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 ARGFXA6NJG6 315 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 VSTM2BA6NLU5 285 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 LCMT2O60294 686 aaKnown RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 RFPL1O75677 317 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 ALBP02768 609 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 STATHP02808 62 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 PDGFAP04085 211 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 NR1D1P20393 614 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 OTX2P32243 289 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 SPRP35270 261 aaPredicted RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 BCL6P41182 706 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 FOLR3P41439 243 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 CDKL1Q00532 357 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 NAB1Q13506 487 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 ATP1A4Q13733 1029 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 SSPNQ14714 243 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 MUM1Q2TAK8 710 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 C18orf21Q32NC0 220 aaPredicted RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 GLE1Q53GS7 698 aaKnown RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 PPP1R32Q7Z5V6 425 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 MRGPREQ86SM8 312 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 OR4K1Q8NGD4 311 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 C9orf43Q8TAL5 461 aaPredicted RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 ATL1Q8WXF7 558 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 PTERQ96BW5 349 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 TRIM44Q96DX7 344 aaPredicted RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 UBXN10Q96LJ8 280 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 ING2Q9H160 280 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 WDR54Q9H977 334 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 ZNF71Q9NQZ8 489 aaPredicted RBP14.53□□□□□ -0.08
PRKN-201ENST00000338468 TXNDC16Q9P2K2 825 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 CTNNAL1Q9UBT7 734 aa14.53□□□□□ -0.08
PRKN-201ENST00000338468 SPENQ96T58 3664 aaKnown RBP14.52□□□□□ -0.08
PRKN-201ENST00000338468 USP9YO00507 2555 aaPredicted RBP14.52□□□□□ -0.08
PRKN-201ENST00000338468 FOXS1O43638 330 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 CD63P08962 238 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 CCDC166P0CW27 439 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 CD1DP15813 335 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 STMN1P16949 149 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 SLC12A2P55011 1212 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 RAB10P61026 200 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 RPS15AP62244 130 aaKnown RBP14.52□□□□□ -0.09
PRKN-201ENST00000338468 FOXK1P85037 733 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 DLG1Q12959 904 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 OR4D1Q15615 310 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 CATSPEREQ5SY80 951 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 GARNL3Q5VVW2 1013 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 PRMT9Q6P2P2 845 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 CMC1Q7Z7K0 106 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 ADAMTSL2Q86TH1 951 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 AMER3Q8N944 861 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 IFT81Q8WYA0 676 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 NEIL2Q969S2 332 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 RERGQ96A58 199 aaPredicted RBP14.52□□□□□ -0.09
PRKN-201ENST00000338468 TM4SF19Q96DZ7 209 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 TSPAN17Q96FV3 270 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 CABS1Q96KC9 395 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 MACROD1Q9BQ69 325 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 HAUS8Q9BT25 410 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 FUT8Q9BYC5 575 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 FAM129AQ9BZQ8 928 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 SPNS1Q9H2V7 528 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 ZNF304Q9HCX3 659 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 TP53TG5Q9Y2B4 290 aa14.52□□□□□ -0.09
PRKN-201ENST00000338468 NBASA2RRP1 2371 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 IGLV3-12A0A075B6K2 115 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 CEACAM4O75871 244 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 SLC35E2BP0CK96 405 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms