RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ACPPP15309 386 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TAP2Q03519 686 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 PON2Q15165 354 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 IRF4Q15306 451 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 AGBL4Q5VU57 503 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3GQ6DHY5 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3CQ6IPX1 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 KRT80Q6KB66 452 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 DGLUCYQ7Z3D6 616 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3Q8IZP1 549 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 SNX19Q92543 992 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TFGQ92734 400 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 GLMNQ92990 594 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 CCDC138Q96M89 665 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TRMT61BQ9BVS5 477 aaKnown RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 ZDHHC5Q9C0B5 715 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 ABCG4Q9H172 646 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 THAP10Q9P2Z0 257 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 KCNE2Q9Y6J6 123 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 H7BY64 318 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 hCG_2039718K7EN88 272 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 AP2A2O94973 939 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 PAPLNO95428 1278 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 OPN1SWP03999 348 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 KLK1P06870 262 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 COL9A1P20849 921 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 CDK3Q00526 305 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 BNIP2Q12982 314 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 KCNC3Q14003 757 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ATAT1Q5SQI0 421 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 PNCKQ6P2M8 343 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 VTCN1Q7Z7D3 282 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF786Q8N393 782 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 L3MBTL4Q8NA19 623 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 TRPV3Q8NET8 790 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 PRAP1Q96NZ9 151 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 SLC29A3Q9BZD2 475 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 RAPGEFL1Q9UHV5 662 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 GPSM3Q9Y4H4 160 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 TMEM221A6NGB7 291 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 CXCR6O00574 342 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 GNGT2O14610 69 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 KPNA5O15131 536 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 B4GAT1O43505 415 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 GMNNO75496 209 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 APODP05090 189 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 LAMP2P13473 410 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 KIR3DL1P43629 444 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 MAPK10P53779 464 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 EEFSECP57772 596 aaKnown RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 RAE1P78406 368 aaKnown RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF385BQ569K4 471 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ANKRD54Q6NXT1 300 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 HMGN2P46Q86SG4 172 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 AMZ2Q86W34 360 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 WDR20Q8TBZ3 569 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 LRIG1Q96JA1 1093 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 VPS35Q96QK1 796 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 AGPAT4Q9NRZ5 378 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 MRGBPQ9NV56 204 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 SPASTQ9UBP0 616 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 MSRAQ9UJ68 235 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 GABRR3A8MPY1 467 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 PDZK1P1A8MUH7 402 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 NME6O75414 186 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ANXA6P08133 673 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ENGP17813 658 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 MTHFRP42898 656 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 CLDN8P56748 225 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 SLCO4C1Q6ZQN7 724 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 SMYD1Q8NB12 490 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 OR9A1PQ8NGU1 263 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 TMIGD2Q96BF3 282 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 CMTM7Q96FZ5 175 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 NR1H4Q96RI1 486 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 BARD1Q99728 777 aaKnown RBP12.13□□□□□ -0.47
LIMK1-201ENST00000336180 KLHL25Q9H0H3 589 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
LIMK1-201ENST00000336180 FRYLO94915 3013 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ELOVL7A1L3X0 281 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 DLGAP1O14490 977 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 EGFP01133 1207 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ASGR2P07307 311 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 SMIM18P0DKX4 95 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 IGFBP4P22692 258 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 GSSP48637 474 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 PPP2CBP62714 309 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 PPP2CAP67775 309 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 CBX3Q13185 183 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms