RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 YKT6O15498 198 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 AOAHP28039 575 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 VASPP50552 380 aaPredicted RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 ACY1Q03154 408 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 TAP2Q03519 686 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 CBLBQ13191 982 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 TMEM52BQ4KMG9 183 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 NOXRED1Q6NXP6 359 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 C6orf89Q6UWU4 347 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 PDZD3Q86UT5 571 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 OFCC1Q8IZS5 231 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 ZNF786Q8N393 782 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 SDR16C5Q8N3Y7 309 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 OR7G3Q8NG95 312 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 OR52L1Q8NGH7 329 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 UTP15Q8TED0 518 aaKnown RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 OLFM1Q99784 485 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 REXO4Q9GZR2 422 aaKnown RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 DENND2DQ9H6A0 471 aaPredicted RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 AIG1Q9NVV5 245 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 ACTR3BQ9P1U1 418 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 A0A0J9YVX5 310 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 TCRBV21S2A2A0A5A6 115 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 TTC24A2A3L6 582 aaPredicted RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 H7BY64 318 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 DUX1O43812 170 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 BCKDHAP12694 445 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 LHCGRP22888 699 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 NOS3P29474 1203 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 PRDX1Q06830 199 aaKnown RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 NFATC4Q14934 902 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 GRIN2CQ14957 1233 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 MLF2Q15773 248 aaPredicted RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 ABHD13Q7L211 337 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 GOLGA7Q7Z5G4 137 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 BHLHE22Q8NFJ8 381 aaPredicted RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 PRAP1Q96NZ9 151 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 VPS35Q96QK1 796 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 CAPN10Q9HC96 672 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 IL1RAPQ9NPH3 570 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 SCHIP1Q9P0W5 487 aaPredicted RBP6.65□□□□□ -1.35
SF3B1-201ENST00000335508 CDH22Q9UJ99 828 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 NME7Q9Y5B8 376 aa6.65□□□□□ -1.35
SF3B1-201ENST00000335508 BRWD3Q6RI45 1802 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SBF2Q86WG5 1849 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 WNK2Q9Y3S1 2297 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SNNO75324 88 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 GSNP06396 782 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 ALDH4A1P30038 563 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 IDH2P48735 452 aaKnown RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 IRF9Q00978 393 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 FCHO2Q0JRZ9 810 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 TOP3AQ13472 1001 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 UBAP2LQ14157 1087 aaKnown RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 IFI44LQ53G44 452 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 BHLHA9Q7RTU4 235 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 CLHC1Q8NHS4 586 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 RHBDF1Q96CC6 855 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SLC45A3Q96JT2 553 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 NR1H4Q96RI1 486 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 NDC1Q9BTX1 674 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 APOOQ9BUR5 198 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 TRPV4Q9HBA0 871 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 ZBTB26Q9HCK0 441 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 Q9N2J8 555 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 CD320Q9NPF0 282 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 PDE10AQ9Y233 779 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 MYRFQ9Y2G1 1151 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 MUSKO15146 869 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 NUDT14O95848 222 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 TPP2P29144 1249 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SLC7A1P30825 629 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 GSK3BP49841 420 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 ARSFP54793 590 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 PDCD4Q53EL6 469 aaKnown RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 FBXO48Q5FWF7 155 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 TNFAIP8L3Q5GJ75 292 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SPANXN4Q5MJ08 99 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 ADAMTSL4Q6UY14 1074 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 PIK3C3Q8NEB9 887 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 OR4E2Q8NGC2 313 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 ECHDC3Q96DC8 303 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 TRIM4Q9C037 500 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 KCNK12Q9HB15 430 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SPATA6Q9NWH7 488 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 FAM53CQ9NYF3 392 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 PRODH2Q9UF12 536 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 KLHL3Q9UH77 587 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 COQ9O75208 318 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 IGHA2P01877 340 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 CD63P08962 238 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 CEP97Q8IW35 865 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 C8orf59Q8N0T1 100 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-201ENST00000335508 ANKRD49Q8WVL7 239 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 PHF21AQ96BD5 680 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 SLC38A2Q96QD8 506 aa6.64□□□□□ -1.35
SF3B1-201ENST00000335508 CD180Q99467 661 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms