RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 LRRC39Q96DD0 335 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 MVB12AQ96EY5 273 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 CFAP36Q96G28 342 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 TRIM51Q9BSJ1 452 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 CRB3Q9BUF7 120 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 PCBD2Q9H0N5 130 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 CCDC177Q9NQR7 707 aaPredicted RBP10.67□□□□□ -0.7
C9orf85-201ENST00000334731 TMEM184CQ9NVA4 438 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 TRPC4Q9UBN4 977 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 CHMP2BQ9UQN3 213 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 VWA7Q9Y334 891 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 SNRNP200O75643 2136 aaKnown RBP10.67□□□□□ -0.7
C9orf85-201ENST00000334731 FER1L5A0AVI2 2057 aa10.67□□□□□ -0.7
C9orf85-201ENST00000334731 KCNE1BA0A087WTH5 132 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 CCDC188H7C350 402 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 P2RX6O15547 441 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 FOXS1O43638 330 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 VPS4BO75351 444 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 IPO13O94829 963 aaKnown RBP10.66□□□□□ -0.7
C9orf85-201ENST00000334731 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
C9orf85-201ENST00000334731 GNLYP22749 145 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 UQCRFS1P47985 274 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 PGGT1BP53609 377 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 ARL4CP56559 192 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 IL2P60568 153 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 TBPL1P62380 186 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 SNRPNP63162 240 aaKnown RBP10.66□□□□□ -0.7
C9orf85-201ENST00000334731 Q0VFX4 171 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 SP140Q13342 867 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 NAE1Q13564 534 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 FRG1Q14331 258 aaKnown RBP10.66□□□□□ -0.7
C9orf85-201ENST00000334731 HIF1AQ16665 826 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 ZXDCQ2QGD7 858 aaPredicted RBP10.66□□□□□ -0.7
C9orf85-201ENST00000334731 TUBB8Q3ZCM7 444 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 HECTD2Q5U5R9 776 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 AGTRAPQ6RW13 159 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 MBOAT1Q6ZNC8 495 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 VN1R4Q7Z5H5 301 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 MYO1HQ8N1T3 1032 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 ZADH2Q8N4Q0 377 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 FAM26EQ8N5C1 309 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 AMER3Q8N944 861 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 LINGO1Q96FE5 620 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 YIPF2Q9BWQ6 316 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 TRIM31Q9BZY9 425 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 ATG10Q9H0Y0 220 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 RNF14Q9UBS8 474 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 C3orf18Q9UK00 162 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 VPS4AQ9UN37 437 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 B3GNT3Q9Y2A9 372 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 MRPS2Q9Y399 296 aaKnown RBP10.66□□□□□ -0.7
C9orf85-201ENST00000334731 LRRK2Q5S007 2527 aa10.66□□□□□ -0.7
C9orf85-201ENST00000334731 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 A0A0A6YYC8 382 aaPredicted RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 IDSB3KWA1 339 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 TCP11X1B4DZS4 312 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 I3L1I5 382 aaPredicted RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 LCE2BO14633 110 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 FFAR3O14843 346 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 GPR42O15529 346 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 PRPF4O43172 522 aaKnown RBP eCLIP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 STATHP02808 62 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 HIST1H2AGP0C0S8 130 aaPredicted RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 ACPPP15309 386 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 NPPBP16860 134 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 HIST1H2ADP20671 130 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 FDXRP22570 491 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 PAFAH1B1P43034 410 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 EMP2P54851 167 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 RPS15AP62244 130 aaKnown RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 CSNK1G2P78368 415 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 FAM53BQ14153 422 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 CRB2Q5IJ48 1285 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 AGAP7PQ5VUJ5 663 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 IGFL2Q6UWQ7 119 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 Q6ZS92 163 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 C17orf64Q86WR6 236 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 ANKMY2Q8IV38 441 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 GPATCH11Q8N954 259 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 TM9SF4Q92544 642 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 C8orf44Q96CB5 159 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 SNRNP40Q96DI7 357 aaKnown RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 C19orf60Q96EN9 201 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 MMABQ96EY8 250 aaPredicted RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 SNF8Q96H20 258 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 PDLIM5Q96HC4 596 aaKnown RBP10.65□□□□□ -0.7
C9orf85-201ENST00000334731 VPS50Q96JG6 964 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 HIST1H2AHQ96KK5 128 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 AGAP4Q96P64 663 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 KRT12Q99456 494 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 OLFM1Q99784 485 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 HIST1H2AJQ99878 128 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 H2AFJQ9BTM1 129 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 SGPP1Q9BX95 441 aa10.65□□□□□ -0.7
C9orf85-201ENST00000334731 TGIF2Q9GZN2 237 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms