RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 PLEKHS1Q5SXH7 462 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 GDPD4Q6W3E5 623 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 CCDC81Q6ZN84 652 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 GPR156Q8NFN8 814 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 NDNFQ8TB73 568 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 C11orf24Q96F05 449 aaPredicted RBP12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 HHIPL1Q96JK4 782 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 ZNF641Q96N77 438 aaPredicted RBP12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 TPT1P8Q9HAU6 139 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 RC3H2Q9HBD1 1191 aaKnown RBP12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 SAMHD1Q9Y3Z3 626 aaKnown RBP12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 HCFC2Q9Y5Z7 792 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 TRAV19A0A0A6YYK7 116 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 CCL16O15467 120 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 LEFTY1O75610 366 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 EPN2O95208 641 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 SLC16A8O95907 504 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 GBAP04062 536 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 CCDC159P0C7I6 412 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 CTSAP10619 480 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 ACPPP15309 386 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 TNFRSF1BP20333 461 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 CCR3P51677 355 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 SLC35A2P78381 396 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 HKDC1Q2TB90 917 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 ZNF554Q86TJ5 538 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 IGFN1Q86VF2 1251 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 C1orf52Q8N6N3 182 aaKnown RBP12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 CSGALNACT1Q8TDX6 532 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 FCRL1Q96LA6 429 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 GMPPBQ9Y5P6 360 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 PCM1Q15154 2024 aa12.97□□□□□ -0.33
TUBA1B-201ENST00000332858 GOLGA4Q13439 2230 aaKnown RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 REV3LO60673 3130 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 PABPN1LA6NDY0 278 aaKnown RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 NPIPB8E9PQR5 432 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 EIF3FO00303 357 aaPredicted RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 UGT2B11O75310 529 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ACVR2AP27037 513 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 TRPC1P48995 793 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 VBP1P61758 197 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 FPGSQ05932 587 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 GAB1Q13480 694 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ADIPOR2Q86V24 386 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ANKRD13BQ86YJ7 626 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 DUSP21Q9H596 190 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 PRM3Q9NNZ6 103 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 SPATA6Q9NWH7 488 aaPredicted RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 M0QX08 132 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 GCM2O75603 506 aaPredicted RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 SLCO2B1O94956 709 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 LRG1P02750 347 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 MT-ND2P03891 347 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 C8AP07357 584 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ABCB1P08183 1280 aaPredicted RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 WEE1P30291 646 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 AP1S2P56377 157 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ACSM2AQ08AH3 577 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 RFX4Q33E94 735 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ACSM2BQ68CK6 577 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 CAPN13Q6MZZ7 669 aaPredicted RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 TTC23LQ6PF05 361 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 AGTRAPQ6RW13 159 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ZNF852Q6ZMS4 543 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 CBLL1Q75N03 491 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 TSEN54Q7Z6J9 526 aaKnown RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 METTL3Q86U44 580 aaKnown RBP12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 OR8J2Q8NGG1 315 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 ASZ1Q8WWH4 475 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 FZD4Q9ULV1 537 aa12.96□□□□□ -0.33
TUBA1B-201ENST00000332858 GRM6O15303 877 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 FADS2O95864 444 aaKnown RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 CTSLP07711 333 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 DNAJA1P31689 397 aaKnown RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 RASGRP3Q8IV61 690 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 NAGSQ8N159 534 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 ATG16L2Q8NAA4 619 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 TRUB1Q8WWH5 349 aaKnown RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 ZNF566Q969W8 418 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 SH3YL1Q96HL8 342 aaPredicted RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 COX4I2Q96KJ9 171 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 DUSP26Q9BV47 211 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 GABARAPL1Q9H0R8 117 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 SGK2Q9HBY8 427 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 THUMPD1Q9NXG2 353 aaKnown RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 STOX2Q9P2F5 926 aaPredicted RBP12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 SLC25A13Q9UJS0 675 aa12.95□□□□□ -0.34
TUBA1B-201ENST00000332858 NDRG4Q9ULP0 352 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms