RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GSRP00390 522 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 OLR1P78380 273 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 DHCR24Q15392 516 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
VSTM4-202ENST00000332853 ATG14Q6ZNE5 492 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
VSTM4-202ENST00000332853 ERMP1Q7Z2K6 904 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 RANBP3LQ86VV4 465 aaPredicted RBP12.62□□□□□ -0.39
VSTM4-202ENST00000332853 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.62□□□□□ -0.39
VSTM4-202ENST00000332853 MDGA1Q8NFP4 955 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 GRHL3Q8TE85 626 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 SMPDL3AQ92484 453 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 M0QX08 132 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
VSTM4-202ENST00000332853 TNFP01375 233 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 ALPPL2P10696 532 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 OR1E2P47887 323 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 CARTPTQ16568 116 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 CGB2Q6NT52 195 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 DPY19L2P1Q6NXN4 242 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 IL4I1Q96RQ9 567 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 TBX5Q99593 518 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 SOX17Q9H6I2 414 aaPredicted RBP12.62□□□□□ -0.39
VSTM4-202ENST00000332853 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
VSTM4-202ENST00000332853 TRBC2A0A5B9 178 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 CCDC182A6NF36 153 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 IL12AP29459 219 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 RAB14P61106 215 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 RAB33AQ14088 237 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 OR2T5Q6IEZ7 315 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 OR2T29Q8NH02 315 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 PPP1R14AQ96A00 147 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 PNO1Q9NRX1 252 aaKnown RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 DLGAP4Q9Y2H0 992 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 TFECO14948 347 aaPredicted RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 GPR39O43194 453 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 NDUFAF6Q330K2 333 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 SLC8B1Q6J4K2 584 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 CXXC5Q7LFL8 322 aaKnown RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 ACVR1CQ8NER5 493 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 ZNF354BQ96LW1 612 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 BTBD1Q9H0C5 482 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 DNAJC15Q9Y5T4 150 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 ATP4BP51164 291 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 CDK6Q00534 326 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 NOXRED1Q6NXP6 359 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 KLHDC10Q6PID8 442 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 KDELC1Q6UW63 502 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 TTLQ8NG68 377 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 BORCS5Q969J3 196 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 TOP1MTQ969P6 601 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 C17orf62Q9BQA9 187 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 MRTO4Q9UKD2 239 aaKnown RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 GOLGA4Q13439 2230 aaKnown RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 NUDT6P53370 316 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 ID2Q02363 134 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 MZT2BQ6NZ67 158 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 NRSN1Q8IZ57 195 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 TRAM1L1Q8N609 369 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 MGME1Q9BQP7 344 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 FZD3Q9NPG1 666 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 P2RX2Q9UBL9 471 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 LOC100130705A0A1B0GUX0 176 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 IQCMA0A1B0GVH7 501 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 A8MU76 341 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 OAS1P00973 400 aaKnown RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 TYRP1P17643 537 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 CSNK2A2P19784 350 aaPredicted RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 FAM91A1Q658Y4 838 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 ABHD13Q7L211 337 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 FUBP1Q96AE4 644 aaKnown RBP12.61□□□□□ -0.39
VSTM4-202ENST00000332853 EXO5Q9H790 373 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 TBC1D17Q9HA65 648 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 CALML5Q9NZT1 146 aa12.61□□□□□ -0.39
VSTM4-202ENST00000332853 FEZF1A0PJY2 475 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 ZNF99A8MXY4 864 aaPredicted RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 FAM189A1O60320 539 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 TM4SF4P48230 202 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 LBX1P52954 281 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 USP30Q70CQ3 517 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 HMGN2P46Q86SG4 172 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 RAB8BQ92930 207 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 PEX13Q92968 403 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 CEP295NLQ96MC4 621 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 RNF38Q9H0F5 515 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 POLR2J3Q9H1A7 115 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 IGLON5A6NGN9 336 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 H3BSA7 217 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 KHDRBS3O75525 346 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 RSL1D1O76021 490 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 KLF8O95600 359 aaPredicted RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 RNF144AP50876 292 aaPredicted RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 CWF19L1Q69YN2 538 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 SLC30A6Q6NXT4 461 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms