RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 KLK3P07288 261 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 GNAZP19086 355 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 BCL6P41182 706 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 RELAQ04206 551 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 SETDB1Q15047 1291 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 PDK4Q16654 411 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 C1orf189Q5VU69 101 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 FAM199XQ6PEV8 388 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 NXPE4Q6UWF7 544 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 DSELQ8IZU8 1212 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 RIBC1Q8N443 379 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 CSNK1A1LQ8N752 337 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 KIAA1143Q96AT1 154 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 LRFN5Q96NI6 719 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 CCNL2Q96S94 520 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 AKIRIN1Q9H9L7 192 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 OPTCQ9UBM4 332 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 NDOR1Q9UHB4 597 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 URB1O60287 2271 aaKnown RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 AHCTF1Q8WYP5 2266 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 FITM1A5D6W6 292 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 CLGNO14967 610 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 KLK8O60259 260 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 SMIM24O75264 130 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 ERLIN1O75477 346 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 LIFP15018 202 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 ALAS2P22557 587 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 VARSP26640 1264 aaKnown RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 RORAP35398 523 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 DLSTP36957 453 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 ARSFP54793 590 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 ALDH18A1P54886 795 aaKnown RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 HKDC1Q2TB90 917 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 RHBDD2Q6NTF9 364 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 C16orf46Q6P387 395 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 TTLL10Q6ZVT0 673 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 LCA5Q86VQ0 697 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 TBC1D19Q8N5T2 526 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 PTGR2Q8N8N7 351 aaPredicted RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 OR4K1Q8NGD4 311 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 CT55Q8WUE5 264 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 AIF1LQ9BQI0 150 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 CAPS2Q9BXY5 557 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 ROPN1BQ9BZX4 212 aaPredicted RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 SPNS1Q9H2V7 528 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 GPN2Q9H9Y4 310 aaPredicted RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 ROPN1Q9HAT0 212 aaPredicted RBP15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 CUTCQ9NTM9 273 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 GPRC5BQ9NZH0 403 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 TMEM216Q9P0N5 145 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 CROTQ9UKG9 612 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 PCDHGA4Q9Y5G9 962 aa15.18■□□□□ 0.02
CCDC28A-201ENST00000332797 TRBC2A0A5B9 178 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 HYKKA2RU49 373 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 LRRC14BA6NHZ5 514 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 K7EPI3 171 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 P2RX6O15547 441 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 OR1F1O43749 312 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 LCMT2O60294 686 aaKnown RBP15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 GSTA1P08263 222 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 C1GALT1C1LP0DN25 315 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 SPTBP11277 2137 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 GCGRP47871 477 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 REEP5Q00765 189 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 PRTGQ2VWP7 1150 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 YOD1Q5VVQ6 348 aaPredicted RBP15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 C19orf48Q6RUI8 117 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 SLCO4C1Q6ZQN7 724 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 VN1R4Q7Z5H5 301 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 MFSD9Q8NBP5 474 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 ZNF740Q8NDX6 193 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 PROKR1Q8TCW9 393 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 PHF21BQ96EK2 531 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 THAP11Q96EK4 314 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 NLNQ9BYT8 704 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 CHST8Q9H2A9 424 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 CPNE5Q9HCH3 593 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 ENAMQ9NRM1 1142 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 TMCO1Q9UM00 188 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 RUVBL1Q9Y265 456 aaKnown RBP15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 ANGPTL3Q9Y5C1 460 aa15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 DSPP15924 2871 aaKnown RBP15.17■□□□□ 0.02
CCDC28A-201ENST00000332797 KCNE1BA0A087WTH5 132 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 GLRA3O75311 464 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 SIX3O95343 332 aaPredicted RBP15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 TCN2P20062 427 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 AGXTP21549 392 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 UCNP55089 124 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 TMPRSS3P57727 454 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 DNASE1L3Q13609 305 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 SLBPQ14493 270 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 FAM214AQ32MH5 1076 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 KRT71Q3SY84 523 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 XKR6Q5GH73 641 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 ZNF385CQ66K41 422 aaPredicted RBP15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 ATG9BQ674R7 924 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 LCN10Q6JVE6 187 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 CCDC81Q6ZN84 652 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 ASPGQ86U10 573 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms