RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 MTA1Q13330 715 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 DUOXA1Q1HG43 343 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 MS4A13Q5J8X5 152 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.65□□□□□ -0.22
EPHB3-201ENST00000330394 LYPLAL1Q5VWZ2 237 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 TMEM151AQ8N4L1 468 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 ALPK1Q96QP1 1244 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 SPATA5L1Q9BVQ7 753 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 MMP28Q9H239 520 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 SLC32A1Q9H598 525 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 WDR6Q9NNW5 1121 aaKnown RBP13.65□□□□□ -0.22
EPHB3-201ENST00000330394 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
EPHB3-201ENST00000330394 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 CLDN7O95471 211 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 CYP2A6P11509 494 aaPredicted RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 HSF2Q03933 536 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 CYP4V2Q6ZWL3 525 aaPredicted RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 GOLM1Q8NBJ4 401 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 RHEBL1Q8TAI7 183 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 DHRS7Q9Y394 339 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 NINQ8N4C6 2090 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 HPRP00739 348 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 CKBP12277 381 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 RPL4P36578 427 aaKnown RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 HEPACAMQ14CZ8 416 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 PCBP2Q15366 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 VMACQ2NL98 169 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 SH2D5Q6ZV89 423 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 MMAAQ8IVH4 418 aaKnown RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 GPC2Q8N158 579 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 SLITRK2Q9H156 845 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 ELAC1Q9H777 363 aaKnown RBP13.64□□□□□ -0.23
EPHB3-201ENST00000330394 PFDN2Q9UHV9 154 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 A0A1W2PRB8 838 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 NUAK1O60285 661 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 UPK1BO75841 260 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 DNAJB5O75953 348 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 BMP4P12644 408 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 MAPK8P45983 427 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 ZXDBP98169 803 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 CDK6Q00534 326 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 DPY19L1Q2PZI1 675 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 LETMD1Q6P1Q0 360 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 ING5Q8WYH8 240 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 QRFPRQ96P65 431 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 SLC2A13Q96QE2 648 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 IL12RB2Q99665 862 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
EPHB3-201ENST00000330394 FAM25EA8MYX2 175 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 FHP07954 510 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 SAGP10523 405 aaPredicted RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 GKP32189 559 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 NSG1P42857 185 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 GPR1P46091 355 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MAZP56270 477 aaKnown RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MED27Q6P2C8 311 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MAL2Q969L2 176 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 UBE2E3Q969T4 207 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 FUBP1Q96AE4 644 aaKnown RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 ZSCAN5AQ9BUG6 496 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 LTB4R2Q9NPC1 389 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 FARSBQ9NSD9 589 aaKnown RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 TAS2R7Q9NYW3 318 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 NLKQ9UBE8 527 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 INMT-MINDY4F8WBC2 141 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MATN4O95460 622 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MAGEA3P43357 314 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 ZNF81P51508 661 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 CDH4P55283 916 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 SELPLGQ14242 412 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 DPY19L3Q6ZPD9 716 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 CFAP206Q8IYR0 622 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 CADM3Q8N126 398 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 OR13F1Q8NGS4 319 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 NFKBIZQ9BYH8 718 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 DUS2Q9NX74 493 aaKnown RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MAT2BQ9NZL9 334 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 ZNF24P17028 368 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 CA5AP35218 305 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 RGS8P57771 180 aaPredicted RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 C22orf42Q6IC83 251 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 HMGN2P46Q86SG4 172 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 FUNDC1Q8IVP5 155 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 SLC22A15Q8IZD6 547 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 CADM2Q8N3J6 435 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 ZNF655Q8N720 491 aaPredicted RBP13.63□□□□□ -0.23
EPHB3-201ENST00000330394 ZFP41Q8N8Y5 198 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 MTMR14Q8NCE2 650 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
EPHB3-201ENST00000330394 CACNA1SQ13698 1873 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms