RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PHEXP78562 749 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 SRSF11Q05519 484 aaKnown RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 MLF2Q15773 248 aaPredicted RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 UGT8Q16880 541 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 OR4F3Q6IEY1 312 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 FAM129CQ86XR2 697 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 RAB42Q8N4Z0 105 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 GPR156Q8NFN8 814 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 CDC26Q8NHZ8 85 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 LRTOMTQ8WZ04 291 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 STARD8Q92502 1023 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 SH3KBP1Q96B97 665 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 CAMK1GQ96NX5 476 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 SH3GL1Q99961 368 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 INPP5KQ9BT40 448 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 THUMPD3Q9BV44 507 aaKnown RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 PHF7Q9BWX1 381 aaPredicted RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 PCBD2Q9H0N5 130 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 UBE2ZQ9H832 354 aaPredicted RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 IMP3Q9NV31 184 aaKnown RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 MAGEL2Q9UJ55 1249 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 AP3M1Q9Y2T2 418 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 A0A1W2PPV9 198 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TCRBV5S2A0A599 114 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 COX7A2P14406 83 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 CD72P21854 359 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 PSMA4P25789 261 aaKnown RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 PIK3CBP42338 1070 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 CLCA4Q14CN2 919 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GTDC1Q4AE62 458 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GALNT18Q6P9A2 607 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TMIGD1Q6UXZ0 262 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 ANKRD46Q86W74 232 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 ADGRG5Q8IZF4 528 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 ZNF740Q8NDX6 193 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 OR7A2PQ8NGA2 310 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 NELL1Q92832 810 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 ZNF583Q96ND8 569 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 OR2M4Q96R27 311 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 REXO4Q9GZR2 422 aaKnown RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 IKZF5Q9H5V7 419 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 SLC6A13Q9NSD5 602 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 SIRT5Q9NXA8 310 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 MAPRE3Q9UPY8 281 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 CA5BQ9Y2D0 317 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 PCDHB14Q9Y5E9 798 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 SZT2Q5T011 3432 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 PRSS38A1L453 326 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 LRRC72A6NJI9 287 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 PDZK1P1A8MUH7 402 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 PCDH7O60245 1069 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TIPRLO75663 272 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 B3GALT4O96024 378 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TGFB1P01137 390 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GPIP06744 558 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 HOXB9P17482 250 aaPredicted RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 IL10P22301 178 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GTF2A1P52655 376 aaPredicted RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 NFATC4Q14934 902 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 UAP1L1Q3KQV9 507 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TBCELQ5QJ74 424 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GLYATQ6IB77 296 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 LPCAT2Q7L5N7 544 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TICAM1Q8IUC6 712 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 TMEM132CQ8N3T6 1108 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GAS2L1Q99501 681 aaPredicted RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 CPPED1Q9BRF8 314 aaPredicted RBP14.37□□□□□ -0.11
TPM3-205ENST00000328159 WASH6PQ9NQA3 447 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 AURKCQ9UQB9 309 aa14.37□□□□□ -0.11
TPM3-205ENST00000328159 GNG14A0A1W2PPG7 69 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 SCAMP1O15126 338 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 SCAMP2O15127 329 aaKnown RBP14.36□□□□□ -0.11
TPM3-205ENST00000328159 GSNP06396 782 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 GGT1P19440 569 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 PTPN6P29350 595 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 HPCAL1P37235 193 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 CDKN2CP42773 168 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 TRPC1P48995 793 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 WNT3P56703 355 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 CTBSQ01459 385 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 KRT33BQ14525 404 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 RBBP5Q15291 538 aaKnown RBP14.36□□□□□ -0.11
TPM3-205ENST00000328159 CYP51A1Q16850 503 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 DUOXA1Q1HG43 343 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 HMBOX1Q6NT76 420 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 IRGCQ6NXR0 463 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 ARMCX6Q7L4S7 300 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 ERMP1Q7Z2K6 904 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 VN1R5Q7Z5H4 357 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 LINC01555Q8NAE3 123 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 ICA1LQ8NDH6 482 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 OR2T12Q8NG77 320 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 OR8J2Q8NGG1 315 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 OR10A6Q8NH74 314 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 FAM110BQ8TC76 370 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 HMGB4Q8WW32 186 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 OR1E3Q8WZA6 343 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms