RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CDCA4Q9BXL8 241 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 FAM83DQ9H4H8 585 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 PRDM5Q9NQX1 630 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 PLXNA4Q9HCM2 1894 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 OR5K3A6NET4 321 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 H3BM21 787 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TMCC2O75069 709 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 KCNK5O95279 499 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 EPOP01588 193 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 SLC10A3P09131 477 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 IDH2P48735 452 aaKnown RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 HSPA7P48741 367 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 KCNQ1P51787 676 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 DAB2P98082 770 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 FAM205BPQ63HN1 556 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 PDE12Q6L8Q7 609 aaKnown RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 FAM171BQ6P995 826 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 XKRXQ6PP77 449 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 RNF165Q6ZSG1 346 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CREB3L2Q70SY1 520 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 KRT73Q86Y46 540 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 PTOV1Q86YD1 416 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 FBXL6Q8N531 539 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF557Q8N988 423 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TRMT61AQ96FX7 289 aaKnown RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 FEVQ99581 238 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF556Q9HAH1 456 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TXNRD2Q9NNW7 524 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 DLGAP4Q9Y2H0 992 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 IPPQ9Y573 584 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 M0R129 80 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 STX7O15400 261 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TAPBPO15533 448 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 RHOQP17081 205 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TGM4P49221 684 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 RPS14P62263 151 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 SGO1Q5FBB7 561 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 SDE2Q6IQ49 451 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TAPT1Q6NXT6 567 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 DENND6BQ8NEG7 585 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 NLGN4YQ8NFZ3 816 aaPredicted RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 OR4M2Q8NGB6 313 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 OPALINQ96PE5 141 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TRIB3Q96RU7 358 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 RTP3Q9BQQ7 232 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 CCM2Q9BSQ5 444 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TRIM62Q9BVG3 475 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 NSUN3Q9H649 340 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 HHATLQ9HCP6 504 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 ABCC13Q9NSE7 274 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 ELOVL2Q9NXB9 296 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 MS4A12Q9NXJ0 267 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TSR3Q9UJK0 312 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 SLC6A14Q9UN76 642 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 PLA2G10O15496 165 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 OR2B3O76000 313 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 FHP07954 510 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 ACADMP11310 421 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 NAGAP17050 411 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 ALAS2P22557 587 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 CLDN8P56748 225 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 SAXO2Q658L1 398 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TSEN54Q7Z6J9 526 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 AMIGO1Q86WK6 493 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 OMA1Q96E52 524 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 POLR1EQ9GZS1 481 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 SARS2Q9NP81 518 aaKnown RBP12.37□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 CPA4Q9UI42 421 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 CMAHPQ9Y471 501 aa12.37□□□□□ -0.43
CCDC60-201ENST00000327554 IQCF5A8MTL0 148 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 FFAR2O15552 330 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 ULK1O75385 1050 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 SLC25A27O95847 323 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 POU3F3P20264 500 aaPredicted RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CPN2P22792 545 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CSTF2P33240 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 PBX3P40426 434 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CRYBA2P53672 197 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 ARPP19P56211 112 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF648Q5T619 568 aaPredicted RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 LRRC66Q68CR7 880 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 SLC5A8Q8N695 610 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 C3orf58Q8NDZ4 430 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 GPR152Q8TDT2 470 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 BTN2A2Q8WVV5 523 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 KCNJ9Q92806 393 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 SMIM14Q96QK8 99 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms