RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TPT1P8Q9HAU6 139 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 CFAP20Q9Y6A4 193 aaKnown RBP7.71□□□□□ -1.18
CIITA-201ENST00000324288 WNT7AO00755 349 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 LDB2O43679 373 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 RHDQ02161 417 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 FAM217AQ8IXS0 508 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 CYB5D2Q8WUJ1 264 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 CANT1Q8WVQ1 401 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 TSSK6Q9BXA6 273 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 KCNN3Q9UGI6 736 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 A0A0A6YYH2 397 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 TCRBV7S3A2A0A539 114 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 A6NJ64 397 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 CHRNB2P17787 502 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 PRKACBP22694 351 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 CD47Q08722 323 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 RNF151Q2KHN1 245 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 SLC25A52Q3SY17 297 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 TMEM192Q8IY95 271 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 SLC25A44Q96H78 314 aaPredicted RBP7.71□□□□□ -1.18
CIITA-201ENST00000324288 HSFY1Q96LI6 401 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 C7orf26Q96N11 449 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 SEC61A2Q9H9S3 476 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 EIF5AP63241 154 aaKnown RBP7.71□□□□□ -1.18
CIITA-201ENST00000324288 POU4F3Q15319 338 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 ADGRD1Q6QNK2 874 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 ARSKQ6UWY0 536 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 KIF18BQ86Y91 864 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 TMEM139Q8IV31 216 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 C7orf61Q8IZ16 206 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 ASCC1Q8N9N2 400 aaKnown RBP7.71□□□□□ -1.18
CIITA-201ENST00000324288 TESCQ96BS2 214 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 TMEM209Q96SK2 561 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 ASF1BQ9NVP2 202 aa7.71□□□□□ -1.18
CIITA-201ENST00000324288 C14orf166Q9Y224 244 aaKnown RBP7.71□□□□□ -1.18
CIITA-201ENST00000324288 COL5A2P05997 1499 aaPredicted RBP7.71□□□□□ -1.18
CIITA-201ENST00000324288 TEX13DA0A0J9YY54 714 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 FAM237AA0A1B0GTK4 181 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SSX4O60224 188 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 KELP23276 732 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SGCBQ16585 318 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 BEND4Q6ZU67 534 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 HFE2Q6ZVN8 426 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SERPINA9Q86WD7 417 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ARNTL2Q8WYA1 636 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PLAGL1Q9UM63 463 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 A0A1W2PRQ8 180 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 OR51F1A6NGY5 319 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TLX2O43763 284 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 DFNA5O60443 496 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 LDOC1O95751 146 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 GRK6P43250 576 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 CLCNKBP51801 687 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 RAB4BP61018 213 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 C2orf76Q3KRA6 126 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 CATSPERGQ6ZRH7 1159 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 Q8N9G6 341 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 OR6C4Q8NGE1 309 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 LIN37Q96GY3 246 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 GBA3Q9H227 469 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 NR2E3Q9Y5X4 410 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 FREM3P0C091 2139 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 K7EPI3 171 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MEIS2O14770 477 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 HMGCS1Q01581 520 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MOGQ16653 247 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 C2orf27AQ580R0 203 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 VITQ6UXI7 678 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 METTL27Q8N6F8 245 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 PAK1IP1Q9NWT1 392 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 DEC1Q9P2X7 70 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 UBQLN2Q9UHD9 624 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ADAMDEC1O15204 470 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PSMD10O75832 226 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 OXSR1O95747 527 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 RFTN2Q52LD8 501 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 TIGD3Q6B0B8 471 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 METTL25Q8N6Q8 603 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 RDH12Q96NR8 316 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MTFR1LQ9H019 292 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TP63Q9H3D4 680 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 FZD3Q9NPG1 666 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MIOSQ9NXC5 875 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 NEMP2A6NFY4 417 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 INMT-MINDY4F8WBC2 141 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 CRYZL1O95825 349 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PRKCIP41743 596 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 CDKN2CP42773 168 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 NOMO3P69849 1222 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 BMT2Q1RMZ1 405 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 WASH2PQ6VEQ5 465 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ZNF227Q86WZ6 799 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 NFKBIDQ8NI38 313 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ADAD1Q96M93 576 aaKnown RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 STRA6Q9BX79 667 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MAN2C1Q9NTJ4 1040 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SLC7A8Q9UHI5 535 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TCAF1Q9Y4C2 921 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms