RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 BHLHE22Q8NFJ8 381 aaPredicted RBP17.72■□□□□ 0.43
USP39-201ENST00000323701 OR2A1Q8NGT9 310 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 SNX19Q92543 992 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 GTF2H4Q92759 462 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 PPM1MQ96MI6 270 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 HOPXQ9BPY8 73 aaPredicted RBP17.72■□□□□ 0.43
USP39-201ENST00000323701 HAUS8Q9BT25 410 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 SPHK1Q9NYA1 384 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 SPATA7Q9P0W8 599 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 STX18Q9P2W9 335 aaKnown RBP17.72■□□□□ 0.43
USP39-201ENST00000323701 TMED5Q9Y3A6 229 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 PLXND1Q9Y4D7 1925 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 A6NCN8 305 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 TNFRSF10CO14798 259 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 PEBP1P30086 187 aaKnown RBP17.71■□□□□ 0.43
USP39-201ENST00000323701 ZNF33BQ06732 778 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 TRIM25Q14258 630 aaKnown RBP17.71■□□□□ 0.43
USP39-201ENST00000323701 KRT33BQ14525 404 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 NANOGP8Q6NSW7 305 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 ABRAXAS1Q6UWZ7 409 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 TMIGD1Q6UXZ0 262 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 DHDDSQ86SQ9 333 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 PLD3Q8IV08 490 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 CHTF18Q8WVB6 975 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 SLC13A3Q8WWT9 602 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 PATE1Q8WXA2 126 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 N4BP2L2Q92802 583 aaPredicted RBP17.71■□□□□ 0.43
USP39-201ENST00000323701 NANOGQ9H9S0 305 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 S100A14Q9HCY8 104 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 GID8Q9NWU2 228 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 FRYLO94915 3013 aa17.71■□□□□ 0.43
USP39-201ENST00000323701 H3BNX3 289 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 BCAS2O75934 225 aaPredicted RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 KLHL18O94889 574 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 PRPS2P11908 318 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 HSD17B2P37059 387 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 PTDSS1P48651 473 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 ACSM2AQ08AH3 577 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 EIF2B5Q13144 721 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 ACSM2BQ68CK6 577 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.7■□□□□ 0.42
USP39-201ENST00000323701 SLC6A18Q96N87 628 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 ZNF570Q96NI8 536 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 PRM3Q9NNZ6 103 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 VAPAQ9P0L0 249 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 BTBD3Q9Y2F9 522 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 MRPS17Q9Y2R5 130 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 WDR87Q6ZQQ6 2873 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 NUP214P35658 2090 aaPredicted RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 DFNA5O60443 496 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 LMNAP02545 664 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 HSD3B1P14060 373 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 HOXB3P14651 431 aaPredicted RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 ANPEPP15144 967 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 HSD3B2P26439 372 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 SOX11P35716 441 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 SLC19A1P41440 591 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 CYP4F2P78329 520 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 FZD2Q14332 565 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 GTDC1Q4AE62 458 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 PAGE2BQ5JRK9 111 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 SAMD4BQ5PRF9 694 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 ANKRD26P1Q6NSI1 321 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 DNAJC14Q6Y2X3 702 aaPredicted RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 ANKRD46Q86W74 232 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 MSRB3Q8IXL7 192 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 ABHD11Q8NFV4 315 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 OR7A2PQ8NGA2 310 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 CDC26Q8NHZ8 85 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 ASB9Q96DX5 294 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 ZBTB18Q99592 522 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 SORBS1Q9BX66 1292 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 MVB12BQ9H7P6 319 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 WASH6PQ9NQA3 447 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 SUCOQ9UBS9 1254 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 TDRD6O60522 2096 aaKnown RBP17.7■□□□□ 0.42
USP39-201ENST00000323701 WDFY4Q6ZS81 3184 aa17.7■□□□□ 0.42
USP39-201ENST00000323701 A0A1W2PPC4 97 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 FOXE1O00358 373 aaPredicted RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 PRICKLE3O43900 615 aaPredicted RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 C1QCP02747 245 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 THEGLP0DJG4 465 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 RABIFP47224 123 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 MRPS22P82650 360 aaKnown RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 MTAPQ13126 283 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 RBBP5Q15291 538 aaKnown RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 UGT8Q16880 541 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 CYP2R1Q6VVX0 501 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 SYT12Q8IV01 421 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 HOMEZQ8IX15 550 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 GLB1L3Q8NCI6 653 aaPredicted RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 OR2L8Q8NGY9 312 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 OR52E6Q96RD3 313 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 IKZF5Q9H5V7 419 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 PIF1Q9H611 641 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 SERHLQ9NQF3 203 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 SLC25A37Q9NYZ2 338 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 PCOLCE2Q9UKZ9 415 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms