RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 GPR135Q8IZ08 494 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 EFCAB3Q8N7B9 438 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SIMC1Q8NDZ2 872 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 NEK7Q8TDX7 302 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 PTTG3PQ9NZH4 202 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 DENRO43583 198 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 HEXBP07686 556 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 MAOAP21397 527 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ATP5A1P25705 553 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 HERVK_113P63132 956 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 PTCHD3Q3KNS1 767 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SLC9B2Q86UD5 537 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SEMA4DQ92854 862 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 CHST7Q9NS84 486 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 NUP205Q92621 2012 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 MPDZO75970 2070 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SHOX2O60902 331 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 CDK1P06493 297 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 MAN2A2P49641 1150 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 C3orf38Q5JPI3 329 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 UEVLDQ8IX04 471 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF563Q8TA94 476 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ZBED6CLQ96FA7 236 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 LGR4Q9BXB1 951 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 RICTORQ6R327 1708 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SLC19A2O60779 497 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 TACSTD2P09758 323 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 AZGP1P25311 298 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 IQCF1Q8N6M8 205 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ADAMTS15Q8TE58 950 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SLC22A18Q96BI1 424 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 KCNK13Q9HB14 408 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 BCL9LQ86UU0 1499 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 LRP5LA4QPB2 252 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SEC14L6B5MCN3 397 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 MRPL19P49406 292 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SNTA1Q13424 505 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ASTN1O14525 1302 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 WNT10BO00744 389 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 PPP1R2P9O14990 202 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ESR1P03372 595 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 EEF1A1P68104 462 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 TPRG1LQ5T0D9 272 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 EEF1A1P5Q5VTE0 462 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 UBR7Q8N806 425 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SLC25A51Q9H1U9 297 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ZNHIT2Q9UHR6 403 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 LAMP2P13473 410 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 CAPN3P20807 821 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 PTNP21246 168 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 HTD2P86397 168 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 GHDCQ8N2G8 530 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 USP29Q9HBJ7 922 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 MFSD11O43934 449 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PQBP1O60828 265 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 DCNP07585 359 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CDH13P55290 713 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 FMO1Q01740 532 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SEZ6Q53EL9 994 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 KANK2Q63ZY3 851 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TATDN1Q6P1N9 297 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SPACA7Q96KW9 195 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TIMM8BQ9Y5J9 83 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 UBIAD1Q9Y5Z9 338 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PMM2O15305 246 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CCNB2O95067 398 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 C22orf31O95567 290 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SULT1A2P50226 295 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SEC23BQ15437 767 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 LY6KQ17RY6 165 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 AMZ1Q400G9 498 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PAN2Q504Q3 1202 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 RELL2Q8NC24 303 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 FAM98AQ8NCA5 519 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 DLGAP1O14490 977 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 IMPDH1P20839 514 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 STT3AP46977 705 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 VSX2P58304 361 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ZCCHC23Q6ZST2 131 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 MMP27Q9H306 513 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CPNE5Q9HCH3 593 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SMPD4Q9NXE4 827 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 DUXAA6NLW8 204 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 GKN3PP0CG01 181 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 XRCC1P18887 633 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 GSTM3P21266 225 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 GNRHRP30968 328 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SSR2P43308 183 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 MIIPQ5JXC2 388 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 HIST2H3PS2Q5TEC6 136 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SLC22A25Q6T423 547 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 MAGEH1Q9H213 219 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CDH22Q9UJ99 828 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ANKUB1A6NFN9 424 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 RHOQP17081 205 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 KHKP50053 298 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TSEN15Q8WW01 171 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms