RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DUS1LQ6P1R4 473 aaKnown RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 Q6ZSR6 202 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 CAMKMTQ7Z624 323 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 SYT12Q8IV01 421 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 RNF175Q8N4F7 328 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 FLCNQ8NFG4 579 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 DNAJB14Q8TBM8 379 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 CXorf40BQ96DE9 158 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 TSSK3Q96PN8 268 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 OR52E6Q96RD3 313 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PCED1AQ9H1Q7 454 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 C6orf203Q9P0P8 240 aaPredicted RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 SLAMF8Q9P0V8 285 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 ACTR3BQ9P1U1 418 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 LRRC42Q9Y546 428 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 XIRP2A4UGR9 3374 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 TCRBV3S1A0A5B6 114 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 AQP12BA6NM10 295 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 PRICKLE3O43900 615 aaPredicted RBP17.16■□□□□ 0.34
RAB39A-201ENST00000320578 SEMA3DO95025 777 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 TCN1P20061 433 aaPredicted RBP17.16■□□□□ 0.34
RAB39A-201ENST00000320578 HRH2P25021 359 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 HTR1EP28566 365 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 TIA1P31483 386 aaKnown RBP eCLIP17.16■□□□□ 0.34
RAB39A-201ENST00000320578 RAE1P78406 368 aaKnown RBP17.16■□□□□ 0.34
RAB39A-201ENST00000320578 GAS6Q14393 721 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 ANO7Q6IWH7 933 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 DHFR2Q86XF0 187 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 ADHFE1Q8IWW8 467 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 AQP12AQ8IXF9 295 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 GJD3Q8N144 294 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 METTL4Q8N3J2 472 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 C1orf52Q8N6N3 182 aaKnown RBP17.16■□□□□ 0.34
RAB39A-201ENST00000320578 OR8J2Q8NGG1 315 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 OR52E1Q8NGJ3 308 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 ZFPM2Q8WW38 1151 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 ITCHQ96J02 903 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 SPNS1Q9H2V7 528 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 ALG2Q9H553 416 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 TBC1D29Q9UFV1 150 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 CYP8B1Q9UNU6 501 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 CA5BQ9Y2D0 317 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 C15orf41Q9Y2V0 281 aa17.16■□□□□ 0.34
RAB39A-201ENST00000320578 A0A096LPI6 279 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 TRBV5-3A0A0A0MS03 114 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 A6NCN8 305 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 GSTM2P28161 218 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 MSX2P35548 267 aaPredicted RBP17.15■□□□□ 0.34
RAB39A-201ENST00000320578 GSK3BP49841 420 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 TFF2Q03403 129 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 ALG11Q2TAA5 492 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 ICE2Q659A1 982 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 LCN8Q6JVE9 175 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 GPR180Q86V85 440 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 LMNTD1Q8N9Z9 388 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 FAM156AQ8NDB6 213 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 HIPK4Q8NE63 616 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 GUCD1Q96NT3 240 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 TWSG1Q9GZX9 223 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 PCDHAC1Q9H158 963 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 AHSPQ9NZD4 102 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 OR6C2Q9NZP2 312 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 SCHIP1Q9P0W5 487 aaPredicted RBP17.15■□□□□ 0.34
RAB39A-201ENST00000320578 ICKQ9UPZ9 632 aa17.15■□□□□ 0.34
RAB39A-201ENST00000320578 WBP11Q9Y2W2 641 aaKnown RBP17.15■□□□□ 0.34
RAB39A-201ENST00000320578 SPTBN5Q9NRC6 3674 aaKnown RBP17.15■□□□□ 0.34
RAB39A-201ENST00000320578 A0A1W2PPC4 97 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 KRBA1A5PL33 1030 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 CASQ2O14958 399 aaPredicted RBP17.14■□□□□ 0.34
RAB39A-201ENST00000320578 CCNDBP1O95273 360 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 TNFP01375 233 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 SHMT2P34897 504 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 KIR3DL1P43629 444 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 TRPC1P48995 793 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 PHC1P78364 1004 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 LIPEQ05469 1076 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 LRRC74AQ0VAA2 488 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 CMPK2Q5EBM0 449 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 ADNP2Q6IQ32 1131 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 DCP2Q8IU60 420 aaKnown RBP17.14■□□□□ 0.34
RAB39A-201ENST00000320578 TTLQ8NG68 377 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 CLHC1Q8NHS4 586 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.14■□□□□ 0.34
RAB39A-201ENST00000320578 NRG4Q8WWG1 115 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 TSACCQ96A04 125 aaPredicted RBP17.14■□□□□ 0.34
RAB39A-201ENST00000320578 BIRC7Q96CA5 298 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 SARGQ9BW04 601 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 FAM120CQ9NX05 1096 aaKnown RBP17.14■□□□□ 0.34
RAB39A-201ENST00000320578 NEUROG3Q9Y4Z2 214 aa17.14■□□□□ 0.34
RAB39A-201ENST00000320578 PRSS51A0A1B0GVH4 220 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 FAM170BA6NMN3 283 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 OR52A4PA6NMU1 304 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 BAG2O95816 211 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 ANXA4P09525 319 aaPredicted RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 RPL3P39023 403 aaKnown RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 AASDHQ4L235 1098 aaPredicted RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 RUNDC3AQ59EK9 446 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms